| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3005 |
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| Symbol | |
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| ID | 5801477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 3174555 |
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| End bp | 3175817 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 641340844 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001607374 |
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| Protein GI | 162419857 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000258393 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0000478824 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATATAA AATTAGAAAA AAAGATAAAT ATCAACAGTA GAGAGAAAAT AGTTATACTT
TTCGTGTTGC TTATTCTATT TTTAAGCTGT TTCTTTATTT ATTATTTATT CACCAAAGAA
AGCGTCCTGC TCGTTCCTCG AGAAAGAGCC ATATTCTATA CTGCTCAAAT TGAGCCATAT
CAAGACGTAT TGGTGACACG CGCCATTACG GTACCTAATG AAAGTGTTAT TTTATCAAGT
GAAAGAGGAG GTAAGATTAT TGAAATAGTC AAGCAATCTG CTGAAAATGT GATAAAAGGC
GATGTGATTG CTCGATTATC TAATTATGAC TTCACACTAG AAGCCACATC CAGAATGGCG
GATATTATGG AGCAAATAAA TAGCCTCCGT AATATGAGAA TGAGATTAGA ACAAGATAGC
AGAGATACTC AATTCAGTTT GCAAGAAGCT CAACACCAGA TAGATATAAT TTCTAAAGAT
TTGAGAAGAT ATAAAATACT TGACAAAAAA TTCTTGATTG CAAAGTCTGA ACTAGAACGA
CAGGCCGATA GACTAATAAA TTGGAAAGTT AAGAGTGATA TACTACAAAA ACACAATAGT
AGGAACCAAA AATCATTCCC TTCTCAATTT AAAAACATAG ATGAATCTAT TATATTACTT
GAAAAAATGA TGAAAATGAT TGAAGTTGGC ATTGAGCAAC TCGTTATTAT TGCACCTATT
GATGGTACAT TATCTGTTCT TGATATTGAA TTAGGTCAAC AAATAAAATC AGGTGAAAAA
ATATCAGTAA TAGACAATTT AAATTCATAT TATTTCAATG TTTATTTCAG TGAATATTAT
ATCGATAAGA TAAAACCTAA TACTCAAATT ATCGCACAGA TAAATGGTCA AGATACTCAA
CTACTGATAG AGTCAGTATC AGCAATAGTA GACAATGGAA AATTCAAAGC AAAGCTTAGG
CCAATTGAAT CAGGCATCGC TCATCTTAAA CGAGGGCAAT CTATTGAAAT TCGTATTGCA
TTACAAGAAG AAAATAATCA CGTACTATTA GTCCCAACTG AAAGTGTGTT TTCAAATAGC
AATGGTGACC ATTTTATATA TATTTATCAA GATAAATATG ACCGTGCAAT TAAAACAAAA
GTTGAAGTTA AACGTCGAAA TTCGATTAAA ACAGAGATCA CATCTGGATT ACAGCCAAGT
CAACGCATTG TAAAAATGCC TGATGATAGT GATAAAACAG CAAATATCAT AGAGTTTAAA
TAA
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| Protein sequence | MDIKLEKKIN INSREKIVIL FVLLILFLSC FFIYYLFTKE SVLLVPRERA IFYTAQIEPY
QDVLVTRAIT VPNESVILSS ERGGKIIEIV KQSAENVIKG DVIARLSNYD FTLEATSRMA
DIMEQINSLR NMRMRLEQDS RDTQFSLQEA QHQIDIISKD LRRYKILDKK FLIAKSELER
QADRLINWKV KSDILQKHNS RNQKSFPSQF KNIDESIILL EKMMKMIEVG IEQLVIIAPI
DGTLSVLDIE LGQQIKSGEK ISVIDNLNSY YFNVYFSEYY IDKIKPNTQI IAQINGQDTQ
LLIESVSAIV DNGKFKAKLR PIESGIAHLK RGQSIEIRIA LQEENNHVLL VPTESVFSNS
NGDHFIYIYQ DKYDRAIKTK VEVKRRNSIK TEITSGLQPS QRIVKMPDDS DKTANIIEFK
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