Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2993 |
Symbol | |
ID | 5801465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 3160713 |
End bp | 3162476 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641340832 |
Product | hypothetical protein |
Protein accession | YP_001607362 |
Protein GI | 162421295 |
COG category | [S] Function unknown |
COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000000448613 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGACGACT TAACCCTGCG TTATTTTGAC GCTGAAATGC GCTACCTGCG CGAAGCGGGC GAAGAGTTTG CTCGTGCGCA CCCTGATCGG GCTGCCGGAT TAAATCTGGA TAAAGCCGGG GCGCGTGACC CCTATGTCGA ACGCCTATTT GAAGGCTTTG CCTTTCTGAT GGGCCGACTG CGGGAAAAAC TGGATGACGA CCTGCCGGAA CTGACCGAAG GGTTGGTCAG CCTGCTGTGG CCGCACTACC TGCGTACCAT TCCGTCGCTT TCTATTGTGG AGTTCACCCC ACAATGGCAG GGGATGAAAG AGCGCATGGG GGTGAGTAAA GGTTTTGAAG TGCTGTCCCG CCCCATTGGT GAACGTGAAA CCCGTTGCCG CTATACCACC ACGCAAGAGA TGGACCTGCT CCCGCTGACC CTGCGCCGTG CCGGGCTGGA CAGTGAACCC GATGGCCGGT CGGTTATCCG GCTGCGCTTT TATTGCAGCG CGCTGGCCGA CTGGAGCCGT ATCAACCTGA GCCGCCTGCC GCTCTATTTT GATGCCGATG CGCCGCTGGC CTGCGCCCTG CATGAGGCGC TGACCCTGAA TACCGCCAAA CTCTGGATCC GTTTGCCGGG GCAGGCTGAT CGCCAGCCGC TGGACGGCCA TTTCGCGCCG CTGGGGTTCG GGGAGCAGGA TACACTGTGG CCGAAGGCCG ACAGTGCGTT CAGTGGTTAT CAGCTCTTGC TGGAGTACTT TACCTTCCGC GAAAAGTTTA TGTTTGTCGC GTTGCAGGGG CTGGATGGGA TCGAGCTGCC GGCGGAACTG CCGTGGTTTG AGATTGATGT GGTGCTGGAA AAACGCTGGC AACATGATTT CTCGTTCTCC GAAAAGAACC TGCGCCTGCA TTGTGTGCCG GTGATTAACC TGTTCCCGCT GGAATCGGAC CCGCTGTCAC TTTCTTCATT ACAGACCGAA TACCTGCTGC GCCCAATGCG CATTCAGGAC GGTTATACCG AAGTGTATTC GGTGGACTCG GTGATCTCCT CCCGTCATAC CGGGCATCAG GTCTATGTCC CTTTCACCAG CTTTCGCCAC AAGGGGGGGA TGTTGCGCCA TGATGCGCCG GAGTATTACT ACCATACGCG GGTCAAACGC GGGCCTTCGG GGTTACACGA TACCTGGCTG GTGCTGGGGG GCGAGGCGTT TGATAACCAC AGCGTACCGG ATAATGAAAA TTTGTCGCTG AGCCTGACCG GCACCAACGG GCAGTTACCG CGTAAAGCGC TGCAAAGCAC GGTGCTGGAT ACGGCGGTGA AATCCACCGG GGCTCAGGTG CGGGTGCGTA ATCTCTCCGC GCCGTCATTG CCATGCTACC CGCCGAACCG CGACCGTTTT CACTGGCGGG TGCTGAGCCA TCTGGGCAGT AGTTTTCTGT GGATGATGGA TAACGCCGAA GTGCTGCGCG GCACGCTGGC GCTGTATGAC TGGACGGACA ACGAAATGAA CCGCCGTCGG CTGGAGGCGA TCGCCGAGGT CAAACACAGC GAGATTGAAC GCTTTGAGCG GGGCTATTTG CTGCGCGGGG TGCACATTGA AATCACCCTC GACAGCAACG GCTTTACCGG TACCGGGGAT ATTTGTCTGT TTGGGGAAAT GCTCAGTCGC TTCTTTGCCC TGTATACCGA TATTCACCTG TTTAATCGTC TGACTCTGAT ACTGCAACCG ACAGGAGAAC GTTTGGAATG GGAAGAGAAT CATCAGTCCC GCCTTCCCGG CTAA
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Protein sequence | MDDLTLRYFD AEMRYLREAG EEFARAHPDR AAGLNLDKAG ARDPYVERLF EGFAFLMGRL REKLDDDLPE LTEGLVSLLW PHYLRTIPSL SIVEFTPQWQ GMKERMGVSK GFEVLSRPIG ERETRCRYTT TQEMDLLPLT LRRAGLDSEP DGRSVIRLRF YCSALADWSR INLSRLPLYF DADAPLACAL HEALTLNTAK LWIRLPGQAD RQPLDGHFAP LGFGEQDTLW PKADSAFSGY QLLLEYFTFR EKFMFVALQG LDGIELPAEL PWFEIDVVLE KRWQHDFSFS EKNLRLHCVP VINLFPLESD PLSLSSLQTE YLLRPMRIQD GYTEVYSVDS VISSRHTGHQ VYVPFTSFRH KGGMLRHDAP EYYYHTRVKR GPSGLHDTWL VLGGEAFDNH SVPDNENLSL SLTGTNGQLP RKALQSTVLD TAVKSTGAQV RVRNLSAPSL PCYPPNRDRF HWRVLSHLGS SFLWMMDNAE VLRGTLALYD WTDNEMNRRR LEAIAEVKHS EIERFERGYL LRGVHIEITL DSNGFTGTGD ICLFGEMLSR FFALYTDIHL FNRLTLILQP TGERLEWEEN HQSRLPG
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