| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A2983 |
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| Symbol | |
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| ID | 5801455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 3145370 |
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| End bp | 3147718 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641340824 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001607354 |
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| Protein GI | 162420635 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.389792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000144528 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATACCT TTCTCCCGAC TATTCGGTTT GACCATAGCC ACCACAAACT GGTGGTCCGC
GACAGCACCG CCGCCGTTGA TGTGCTGGGC TTTGAAGGCC ATGAAAGCCT GAGCCAGCCG
TTCTGTTACG ACATCCAATT CACCAGCGCC GACAAGGCGA TTGGCCCGGC GACCATGCTG
ATGCACGACG CGTCACTGAC ATTGGCGGCC CCGATGGCCG AAGCTTTTGG CGTGACGGTT
CAGCAGACCC AGCGGGTGAT CCAAGGGGTG GTCACCGGAT TTAAACGCCT GTCGGCCTCG
AAAGAGGAAT GCCGCTACGA ACTGAGCCTG CAACCGCGCC TGGCCTTGTT ATCGCGCAGC
CATCAGAACG GGATATATCA GGACATGTCG GTGCCGCAGA TTGTGGAAAA AATTCTGCGT
GAGCGCCATG ACATGCGCGG TCAGGATTTT GTCTTCACGC TGGCCCGCGA GTACCCACGC
CGCGAGCAGG TAATGCAATA CGGCGAGGAT GACCTGACCT TTATCCGCCG CCTGCTGGCC
GAGGTGGGGA TCTGGTTTCG TTTTACCGCC GATCCCAAAC TCAATATTGA TGTGGTGGAG
TTTTACGACG ACCAGCGCTT CTATCAGCAA GGACTGACGC TACAGGCGGT GCCGCCTTCG
GGGATGCACG ACAGCGGGAT GGAATCGGTC TGGGACCTGT CCAGCGCCCA TCAGGTGGTG
GAAAAATCGG TCAGTACCGG CGATTACAAC TACCGCACCG CCACTGCCGA CCTGACCGCC
GGGGCCGACA TCACGCGCGG CGATACCACC ACCTACGGCG AAGCCTATCA TTACGCCGAT
AACTATCTGA CCGCAGGCAG CGAAGGGCGC GAGCCGGAAA GTGAAAGTGG GGCCTTTTAT
GCCCGTCTGC GCCATGAACG TTACCTCAAT AATCAGGCGC GCTTCGCCGG GGTGGCCAAT
GCGGCGGCAC TGGCACCGGG TCAGGAACTG AACGTCACCG GCAACGACGT GCCAGCACAG
TTTGGTAAAG GGGTGATAAT CACCCGCATC ACCAGCCATG CCCGCCGCGA CCGCAGCTAT
GAAGTACATT TTGAAGCCAT TCCTTACTCC GAGGATTATT GCTTCCGTCC GGCGCTGATC
CGCAAGCCGA CCATGGCCGG GACCTTGCCG GCGCGGGTGA CCAGTACCAC TGCGAACGAC
ACTTATGGTC ATATCGACAA AGACGGGCGC TACCGTGTCA ACCTGATGTT CGACCGTGAC
AGTTGGGAGT CGGGTTACGA AAGCTTGTGG GTCCGTCAGG CCCGCCCGTA TGCGGGTGAC
AGCTACGGCC TGCACCTGCC GCTGCTGGCA GGCACCGAAG TGGCGATCGC GTTTGAAGAC
GGCAACCCGG ACCGGCCGTA TATCGCCTAT GTGCTACACG ACTCGGCGCA CGGCGACCAT
GTCACCATCA GCAACTACAA ACGCAACGTA CTGCGTACTC CGTCGAATAA CAAACTGCGC
CTGGAGGATG AACGGGGTAA AGAGCACATC AAGCTCAGCA CCGAATATGG CGGCAAAAGC
CAACTGAATC TGGGGCATTT GGTTGATAAC GAGAAACAGC CTCGGGGTGA GGGTTTTGAG
CTGCGCACCG ACAGTTTTGG TGTATTACGG GCAGAAAAAG GCCTCTTTAT CACTGCCGAC
GGACAGGCCA AAGCACAGGG GCAGGTGCTG GAGATGCAAC CGGCTATCAG CCTGTTGAAA
AGTGCGCAGG AACAGATGGA GGCCATCTCC GCGGATGCAC AAACCGCCAC CGCCAGTCCG
GCCGACCTAC AGGTACAAAT CAGTCTGTTG CAGCAAAATC TCACTGAACT GAAACAAGCT
GTCCTGTTAC TGAGTGCGCC AAAGGGGATC GCGTTGAGTA GCGGGGAGCA TCTGCAAATG
AGTGCCAGCG ATAACCTGAT TGCCACCGCC GGTAAAAATG CCGACGTCAG CGTCGCGAAA
AATTTCTTTA TCGGCGTAGG CAATACCCTA AGTATCTTCG TCAGAAAGCT GGGGATGAAA
CTAATAGCCA ATCAGGGGCC GATAACAGTC CAGGCGCAGA ATGATCTAAT GGAGTTATTG
GCGCGTAAAG CGATCACCAT TACCAGCACC GAGGATGAGA TAAAAATCAC CGCCAAGAAG
AGGATCACGC TGAATGCGGG AGGCAGTTAT ATCACGCTGG ATGAGAATCG GATCGAGTCA
GGAACGGCGA GGGAATATTT GACTAAGGCA GGGCATTACG GGCGAGTGGA TAAGGCGAAA
TTGGAGACAG TAGTGCCAAC ATTAGCCGTT AAAGCTAAAC CACCCACTCA GAAGTATCCA
TTTTCTTAA
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| Protein sequence | MNTFLPTIRF DHSHHKLVVR DSTAAVDVLG FEGHESLSQP FCYDIQFTSA DKAIGPATML
MHDASLTLAA PMAEAFGVTV QQTQRVIQGV VTGFKRLSAS KEECRYELSL QPRLALLSRS
HQNGIYQDMS VPQIVEKILR ERHDMRGQDF VFTLAREYPR REQVMQYGED DLTFIRRLLA
EVGIWFRFTA DPKLNIDVVE FYDDQRFYQQ GLTLQAVPPS GMHDSGMESV WDLSSAHQVV
EKSVSTGDYN YRTATADLTA GADITRGDTT TYGEAYHYAD NYLTAGSEGR EPESESGAFY
ARLRHERYLN NQARFAGVAN AAALAPGQEL NVTGNDVPAQ FGKGVIITRI TSHARRDRSY
EVHFEAIPYS EDYCFRPALI RKPTMAGTLP ARVTSTTAND TYGHIDKDGR YRVNLMFDRD
SWESGYESLW VRQARPYAGD SYGLHLPLLA GTEVAIAFED GNPDRPYIAY VLHDSAHGDH
VTISNYKRNV LRTPSNNKLR LEDERGKEHI KLSTEYGGKS QLNLGHLVDN EKQPRGEGFE
LRTDSFGVLR AEKGLFITAD GQAKAQGQVL EMQPAISLLK SAQEQMEAIS ADAQTATASP
ADLQVQISLL QQNLTELKQA VLLLSAPKGI ALSSGEHLQM SASDNLIATA GKNADVSVAK
NFFIGVGNTL SIFVRKLGMK LIANQGPITV QAQNDLMELL ARKAITITST EDEIKITAKK
RITLNAGGSY ITLDENRIES GTAREYLTKA GHYGRVDKAK LETVVPTLAV KAKPPTQKYP
FS
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