Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2968 |
Symbol | |
ID | 5801440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 3131570 |
End bp | 3132307 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641340810 |
Product | short-chain dehydrogenase/reductase family protein |
Protein accession | YP_001607340 |
Protein GI | 162420477 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.189174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0000354482 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCTTT TTATTAGCGG TGGTGCCAGT GGCATTGGAC GAAGTGTGGT CATTGCTGCT TTGAGCAAAG GTTGGAATGT TGGCTTTAGT TATCACAATA ACAAGGAAGG TGCACAACAG TTGCTTGATA TCGCGGTAGC GGAGTTTCCT CGGCAATTAT GTCGTGCCTA TCAACTCGAC GTTATTGATA GTGGTGCAGT AGAGTACGTG GGAGACCGTC TTCTCGTCGA TTTTAGTAAC ATTGATGCGG TTGTTTGCAA TGCTGGCATA GATTTACCGG GCAATTTGGT GTCGATGACC GATGAAGATT GGGCCTTGGT ACTTAATACT AATTTAACTG GCACCTTCTA TCTTATTCGT TATTTTTTGC CTCTATTTCT TGCTAATAAA TATGGGCGCA TTGTCACTCT ATCTTCACTC GCTAAAGATG GGTCATCAGG GCAAGCGGCT TATGCTGCAT CAAAAGCTGG TTTGGTGGGG TTAACTAAAA CAACAGCGAA GGAATATGGA CATTTCGGTA TTACGGCCAA TGTCGTTGTC CCAGGCTTAA TTAATACCGA AATTATTGGT GATGACATTA AGGGTATTAA GAATTTTTTT GCTCAATATG CGCCAGTGGG AAGGCTGGGC TCCCCCAGTG AAGTCGCTGA GGCCATTTTA TTTCTTGTTG CTAAAGAAAG TAGTTATGTA AACGGTGCGG TTTTCAATGT GACCGGTGGC ATTGACTGGG TTTATTAA
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Protein sequence | MNLFISGGAS GIGRSVVIAA LSKGWNVGFS YHNNKEGAQQ LLDIAVAEFP RQLCRAYQLD VIDSGAVEYV GDRLLVDFSN IDAVVCNAGI DLPGNLVSMT DEDWALVLNT NLTGTFYLIR YFLPLFLANK YGRIVTLSSL AKDGSSGQAA YAASKAGLVG LTKTTAKEYG HFGITANVVV PGLINTEIIG DDIKGIKNFF AQYAPVGRLG SPSEVAEAIL FLVAKESSYV NGAVFNVTGG IDWVY
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