| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A2943 |
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| Symbol | tbpA |
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| ID | 5801415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 3097844 |
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| End bp | 3098890 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641340790 |
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| Product | thiamine transporter substrate binding subunit |
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| Protein accession | YP_001607320 |
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| Protein GI | 162421366 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR01276] thiamine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.683707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAACTA CCGCCTCAGA TACCTTTGCC ACCTTTATGT TCAAGGAGTG CAAAGTGTTT
AAACACATTA TTTCCTGCTT ATTACTGATA TCAGCCACCT CCGCGCTTGC CGCAGAAAAA
CCTACGCTGA CGGTCTATAC CTACGACTCC TTTGCTGCTG ACTGGGGCCC AGGCCCGGCG
ATTAAGCAGG CCTTTGAAGC TGAATGCGAT TGCCAGCTAA AATTTGTGGC ACTGGAAGAT
GGCGTTTCAC TGCTGAACCG CCTGCGGATG GAAGGTAAAA ACAGCCAGGC CGATGTGATT
TTAGGGTTGG ATAACAATCT GGTACAGGCG GCAGAACAAA CCGGCTTGTT TACCCCAAGC
CAGGTTGATA CCCGTAACCT GACCCTACCA GAGCCGTGGC AGAATAAGAC ATTTGTCCCT
TACGATTATG GCTATTTTGC TTTTGTGTAT AACAAAGAAA AACTGAAAAA CCCGCCAAAA
AGCCTGCACG AATTAATCAG CAGTAAAGAA CCGTGGAAAG TGATTTATCA AGACCCACGT
ACCAGCACTC CAGGTCTGGG TCTGATGCTG TGGATGCAAA AAGTTTATGG CGATCAAGCC
CCGCAAGCAT GGCAACAACT GGCGCAGAAA ACGGTCACAG TCACCAAAGG CTGGAGCGAG
GCGTATGGCT TGTTCCTCAA GGGGGAAGCG GATTTAGTGC TGAGCTACAC CACCTCTCCG
GCTTATCATT TAATTGCAGA AAAGAATAAC AACTATGCAG CCGCCGATTT CAGTGAAGGC
CACTATTTAC AAGTAGAAGT CGCCGGCCAA CTGGCCGCCA GCAAACAACC TGAACTGGCG
CAGCGCTTTA TGCAATTTAT CGTGACCCCT GCGTTCCAAA ACCACATTCC AACCGGCAAC
TGGATGTATC CAGTGATCAA AATGGATCTA CCCGCCGGGT TCGAGACACT GGCCGTGCCA
CAAACAGCGT TGCAATTTGA TGCTAAAGAC GTGGCGGATA ACCGCAGTAA ATGGATTCAG
GCATGGCAAT CCGCCGTCAG CCGTTAA
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| Protein sequence | MLTTASDTFA TFMFKECKVF KHIISCLLLI SATSALAAEK PTLTVYTYDS FAADWGPGPA
IKQAFEAECD CQLKFVALED GVSLLNRLRM EGKNSQADVI LGLDNNLVQA AEQTGLFTPS
QVDTRNLTLP EPWQNKTFVP YDYGYFAFVY NKEKLKNPPK SLHELISSKE PWKVIYQDPR
TSTPGLGLML WMQKVYGDQA PQAWQQLAQK TVTVTKGWSE AYGLFLKGEA DLVLSYTTSP
AYHLIAEKNN NYAAADFSEG HYLQVEVAGQ LAASKQPELA QRFMQFIVTP AFQNHIPTGN
WMYPVIKMDL PAGFETLAVP QTALQFDAKD VADNRSKWIQ AWQSAVSR
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