Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2942 |
Symbol | sgrR |
ID | 5801414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 3095297 |
End bp | 3096958 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641340789 |
Product | transcriptional regulator SgrR |
Protein accession | YP_001607319 |
Protein GI | 162420995 |
COG category | [R] General function prediction only |
COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.940242 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTACCT CGCGCCTGCA ACAACAATTT ATTCGTCTCT GGCAACGCTA TAACGGACAG TCAACGGAAA CCACATTGCA GGCGCTGGCT GAAGTGCTGA ATTGTTCACG CCGCCATGTA CGTTCTCTGC TGGGCAAGAT GCAGCACGCG GGCTGGCTCG ATTGGCAGGC TGAAGCTGGC CGAGGAAAAC GCTCACAATT GATCTTCTTG CGTTCCGGGC TGGCGCTGCA ACAACAACGG GCTGAAGAGT TGCTGGAGCA GGATCATATT GATCAGTTAG TCCAACTGGT CGGTGATAAA AAAGCGGTAC GCCAAATGTT GCTGTCCCAG TTGGGACGTA GCTTCCGGCA AGGAAAACAT ATTCTGCGGG TGCTCTATTA CCGCCCATTG GAGAACTTAT TACCCGGCAC CGCCCTACGC CGCTCTGAAA CCCATATGGT GCGGCAAATT TTTAACGGGC TGACACGGAT AAATGAGGAA AATGGGGAAC TTGAACCGGA CTTATCTCAT CACTGGCAAG CGATCACCCC CTTGCATTGG CGCTTTTATT TGCGACCAGC CATTCATTTC CACCATGGCC GGGAACTGGA AATGAGTGAT GTGATTAGCA GCCTGACCCG CCTGATCCCC CAACCCCTGT TTTCTCATAT TGCGGAGGTG CGTTCACCGA CACCTTATGT GATTGATGTT TATCTCCATT CGCCAGATCA CTGGTTGCCA TGGCTACTGG GCAGCGTTCA CGCCATGATT TTGCCGCAAG AGTGGGAAAC TCAGCCCGAT TTTCACCGAC AGCCTATTGG TACCGGCCCT TATTCCGTGA TCCGCAATCA TCACAGCCAG CTGAAAATTC AGGCATTCGA TAACTATTTT GGTTTCCGGG CACTGATTGA TGAGGTCAAT ATCTGGGTAC TCCCAGAACT CTCCGAAGAA TTGGTGTATT CCGGGGTGCA ATTGCAAGCC GACGATACGG GTAAAAATGA GCTGGAGAGC CGTTTAGAGG AAGGTTGCTA CTTCTTACTG TTCGACCAAC GATCCCCTCA GGCCTGCACC CCGGAGATCC GCCGTTGGTT ATGTGAATTG ATCACACCGA TAGCGTTACT CAGCCACGCC GCTCCCTTCT ATCAACGTTA CTGGTCACCG GCCTATGGCA TGTTGCCACG CTGGCACCAT AACCGACTCA CCACTCAAGA GCCAAAACCC GAAGGGCTGA ACGAGCTGAC ACTGACGTTT TACAGCGAAC ATTCAGAGTT TGATGCCATC AGCCAGACAC TGACCCAGTT ATTGGCTGCT CAGGGCGTGA CGTTAAAGAT ACAAGTCTTG GACTACACCC GCTGGTATCA GGGGGATGCA CAAAGCGATA TCTGGCTCGG CAGCGCTAAC TTTTACTTGC CACTCGAATT CTCGCTATTT GCCACCCTCT ATGAAATGCC GCTACTACAA CATTGTCTGA GCGAAGAACT GCATCAAGAT ATTGAATCCT GGCGCAATAA TACCTTACTC ATGGCCGATT GGAGCCAACG ACTGGTAAGC CAGCATCAAT TCCATCCGCT ATTTCATCAT TGGTTAGAAT TATACGGTCA ACACAGTATG CGGGGAGTGC GTATGAATAC ACTCGGCTGG TTTGATTTTA AATCCGCATG GTTTACCCCA CCAGAGGCCT AG
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Protein sequence | MSTSRLQQQF IRLWQRYNGQ STETTLQALA EVLNCSRRHV RSLLGKMQHA GWLDWQAEAG RGKRSQLIFL RSGLALQQQR AEELLEQDHI DQLVQLVGDK KAVRQMLLSQ LGRSFRQGKH ILRVLYYRPL ENLLPGTALR RSETHMVRQI FNGLTRINEE NGELEPDLSH HWQAITPLHW RFYLRPAIHF HHGRELEMSD VISSLTRLIP QPLFSHIAEV RSPTPYVIDV YLHSPDHWLP WLLGSVHAMI LPQEWETQPD FHRQPIGTGP YSVIRNHHSQ LKIQAFDNYF GFRALIDEVN IWVLPELSEE LVYSGVQLQA DDTGKNELES RLEEGCYFLL FDQRSPQACT PEIRRWLCEL ITPIALLSHA APFYQRYWSP AYGMLPRWHH NRLTTQEPKP EGLNELTLTF YSEHSEFDAI SQTLTQLLAA QGVTLKIQVL DYTRWYQGDA QSDIWLGSAN FYLPLEFSLF ATLYEMPLLQ HCLSEELHQD IESWRNNTLL MADWSQRLVS QHQFHPLFHH WLELYGQHSM RGVRMNTLGW FDFKSAWFTP PEA
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