| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A2880 |
|---|
| Symbol | acrA |
|---|
| ID | 5801352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 3024754 |
|---|
| End bp | 3025920 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641340731 |
|---|
| Product | multidrug efflux protein |
|---|
| Protein accession | YP_001607261 |
|---|
| Protein GI | 162418598 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.876487 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTGG CTGCAATTCT GGTACTTTCA GGCAGCTTAG TACTTATAGG ATGTAATGAC
AAAGATGCGG CGCAAGCCGG TGCTCAACAA GCTCCTGAGG TTGGTGTTGT GACATTGAAA
GCAGAACCGC TGAATATCAC AACCGATTTG CCAGGCCGCA CGTCCGCCTT CCGTGTTGCA
GAAGTTCGCC CGCAGGTAAG CGGGATTATT CTCAAACGTA ATTATATTGA AGGCAGTGAT
GTCACCGCCG GAACATCCCT TTATCAAATT GACCCTGCGA CTTATCAGGC CGCTTATGAC
AGTGCAAAAG GTGATCTGGC TAAAGCACAG GCTTCAGCAC AAATTGCTCA TTTAACCGTC
AATCGCTACA AGCCATTGTT GGGTACTAAC TACATCAGTA AACAAGAATA TGATCAGGCC
CTATCAGATG CCCAACAAGC AGATGCCACC GTGTTAGCAG CAAAAGCGGC ACTGGAGTCT
GCACGCATTA ATCTGGCGTA TACCCAAGTG AGATCACCAA TCAGCGGCCG TACCGGTAAA
TCTGCCGTGA CGGAAGGTGC ATTGGTTACC AGTGGTCAGG CGTCAGCAAT GACTACCGTT
CAACAGCTTG ATCCAATGTA TGTCGATGTC ACTCAATCGA GTGATGAGTT CCTACGGCTG
AAAAAAGAGC TGGCTGATGG CATTCTCAAG CAAGAAAACG GCAAAGCTAA AGTCCGTTTG
TTGCTGGAAA ACGGGGTTGA ATATACAGAA ACCGGTACTT TGGAGTTCTC CGGTGTCACT
GTTGATGAAA CTACCGGTTC GATTACTCTC CGTGCGATCT TCCCTAATCC AAATGAGGCG
CTGTTGCCAG GCATGTTTGT CCGTGCCCGT TTGGATGAAG GTATCCGTCC TGATGCGCTG
TTAGTTCCGC AACAAGGCGT GACTCGCAAC CCACGTGGTG AAGCAACAGC CATGGTCGTC
GGCGCGGGTA ATAAAGTTGA AATGCGTACC CTGATAGCGA ACCAAGCAAT CGGTAATAAA
TGGCTGGTCA CTGAAGGGCT AAAAGCCGGT GATCGCCTGA TTATTTCCGG CTTGCAGAAA
ATCAAACCAG GTGTAGAGGT AAAAGTGCAG GAAGTTACTG ACACTGCACC AGAAACAGCC
CCGGCTGATA CAGCGAAGAA GTCTTAA
|
|---|
| Protein sequence | MPLAAILVLS GSLVLIGCND KDAAQAGAQQ APEVGVVTLK AEPLNITTDL PGRTSAFRVA
EVRPQVSGII LKRNYIEGSD VTAGTSLYQI DPATYQAAYD SAKGDLAKAQ ASAQIAHLTV
NRYKPLLGTN YISKQEYDQA LSDAQQADAT VLAAKAALES ARINLAYTQV RSPISGRTGK
SAVTEGALVT SGQASAMTTV QQLDPMYVDV TQSSDEFLRL KKELADGILK QENGKAKVRL
LLENGVEYTE TGTLEFSGVT VDETTGSITL RAIFPNPNEA LLPGMFVRAR LDEGIRPDAL
LVPQQGVTRN PRGEATAMVV GAGNKVEMRT LIANQAIGNK WLVTEGLKAG DRLIISGLQK
IKPGVEVKVQ EVTDTAPETA PADTAKKS
|
|---|
| |