Gene YpAngola_A2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2873 
Symbol 
ID5801345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3016106 
End bp3016591 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content42% 
IMG OID641340724 
Producthypothetical protein 
Protein accessionYP_001607254 
Protein GI162419443 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAAG ATATGTTTAT CAAAATTGAT GGTATTGAAG GTGAGTCTTT GGATGCCAAT 
CACAAAAACG AAATCCAGGT ATTAGCTTGG AACTGGGATG TTGCTCAACA CTCGAATATG
CACAGCGGTT CAGGTGGCGG TTCAGGTAAA GCCTCTGTTT CAGATTTTTG CTTCGCACAT
TATATCGATA AAGCTAGCCC GAACTTATTG AGCTATTGCT TGTTGGGTAA GCACATTAAA
AATGTTCAGT TCGTACTGCG TAAAGCTGGT GGCGATCCGC TGGAATATCT GACAATTAAA
TTTACCGATG TCATCATTAC TCGTGTTGAT ATGGCGGGTT CTTTGGAAGA TGAAACGCGT
CCACGTGAAG AAATTCGTTT CTCATTCACT AAGATGACTC AGGACTATGT TATGCAGAAT
GCTGAAGGCC ATAAGTCTGG CGTTATTTCT GCTAACTACG ATGTTAAAGC TAACATGCAC
AGCTAA
 
Protein sequence
MAQDMFIKID GIEGESLDAN HKNEIQVLAW NWDVAQHSNM HSGSGGGSGK ASVSDFCFAH 
YIDKASPNLL SYCLLGKHIK NVQFVLRKAG GDPLEYLTIK FTDVIITRVD MAGSLEDETR
PREEIRFSFT KMTQDYVMQN AEGHKSGVIS ANYDVKANMH S