Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2873 |
Symbol | |
ID | 5801345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 3016106 |
End bp | 3016591 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641340724 |
Product | hypothetical protein |
Protein accession | YP_001607254 |
Protein GI | 162419443 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAAG ATATGTTTAT CAAAATTGAT GGTATTGAAG GTGAGTCTTT GGATGCCAAT CACAAAAACG AAATCCAGGT ATTAGCTTGG AACTGGGATG TTGCTCAACA CTCGAATATG CACAGCGGTT CAGGTGGCGG TTCAGGTAAA GCCTCTGTTT CAGATTTTTG CTTCGCACAT TATATCGATA AAGCTAGCCC GAACTTATTG AGCTATTGCT TGTTGGGTAA GCACATTAAA AATGTTCAGT TCGTACTGCG TAAAGCTGGT GGCGATCCGC TGGAATATCT GACAATTAAA TTTACCGATG TCATCATTAC TCGTGTTGAT ATGGCGGGTT CTTTGGAAGA TGAAACGCGT CCACGTGAAG AAATTCGTTT CTCATTCACT AAGATGACTC AGGACTATGT TATGCAGAAT GCTGAAGGCC ATAAGTCTGG CGTTATTTCT GCTAACTACG ATGTTAAAGC TAACATGCAC AGCTAA
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Protein sequence | MAQDMFIKID GIEGESLDAN HKNEIQVLAW NWDVAQHSNM HSGSGGGSGK ASVSDFCFAH YIDKASPNLL SYCLLGKHIK NVQFVLRKAG GDPLEYLTIK FTDVIITRVD MAGSLEDETR PREEIRFSFT KMTQDYVMQN AEGHKSGVIS ANYDVKANMH S
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