Gene YpAngola_A2872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2872 
Symbol 
ID5801344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3014278 
End bp3015780 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content46% 
IMG OID641340723 
Producthypothetical protein 
Protein accessionYP_001607253 
Protein GI162421644 
COG category[S] Function unknown 
COG ID[COG3517] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03355] type VI secretion protein, EvpB/VC_A0108 family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACTC AAGACGCAAA AACTAAACAA GCTACAGTCG CCAGTGCGAC GGAATATAGC 
GATTTTAATA CATTACTGAC TAAAGAATTT AAAGCGAAGT CTGAGCAAAC GATAGCCGCA
GTAGAAGGTG CCGTTAAAAC GTTGGCTGAG CAAGCGCTGG CTAATTCGGT CACGGTGTCA
GACGATGCTT ATAAAAGTAT TGCTTCCATT ATTGCAGAGA TTGATCGCAA GCTATCAGAT
CAGATTAACT TAATTTTGCA CCACCAAGAA TTCCAGTCTC TGGAAAGCGC ATGGCGTGGG
CTGCACTATT TAGTCAATAA CACCGAGACT GATGAGAAGT TGAGATTACG TTTCCTCGAC
ATTTCTAAAG ATGAATTACG CCGTAACATG AAGCGTTATA AAGGTGTTGC TTGGGATCAA
AGCCCATTAT TCAAAAAAAT CTATGAAGAA GAATATGGCC AATTGGGTGG CGAACCATAC
GGTTGCCTGG TAGCAGACTA TTACTTTGAC CATACTGCAC CTGACGTTGA CTTGTTGGCT
TCAATTGGCA AAGTTGCCGC TTCTGCCCAC GTGCCATTTA TTACAGGTGC TGCACCGTCT
GTGTTGCAAA TGGAATCTTG GCAAGAACTG TCAAACCCAC GTGATTTGAC GAAGATCTTC
ACTCAGAATC TTGAGTATGC CGCATGGAAC TCACTGCGTC AGTCTGAAGA CTCTCGCTAT
ATCGGCCTGG CGATGCCACG TTTCTTGTCG CGTCTGCCTT ATGGGATTAA CACCAATCCG
GTAGATGCCT TCCACTTTGA AGAGACGACT GATGGCGCGG ATCACAGCAA ATATGTGTGG
TCAAATGCGG CTTATGCGAT GGCTGTTAAC ATCAACCGAT CTTTCAAAGA GTATGGCTGG
TGTACGCTGA TTCGTGGTGT GGAAAGTGGT GGTGTTGTTG AAGGCCTGCC ATGCCATACC
TTCCCGACGG ATGACGGCGG TATTGATATG AAATGCCCAA CAGAAATCGC TATTTCTGAC
CGTCGTGAAG CGGAACTGGC CAAGAATGGC TTTATTCCAC TGGTTCACAG AAAGAATACG
GATTACGCGG CATTCATTGG CGCGCAGTCC CTGCAAAAAC CTGCAGAATA TTACGATTCG
GATGCAACGG CGAACGCCAA CCTTTCCGCT CGTCTGCCAT ACCTGTTTGC TTGTTCACGT
TTTGCACATT ATCTGAAGTG CATCGTGCGT GACAAAATCG GCTCTTTTAA AGAGCGTGAT
GAGATGCAAC GTTGGTTGAA TGATTGGGTG ATGAACTATG TTGATGGTGA CCCAGCTAAC
TCTTCCCTGG AAACTAAAGC GCGCCGTCCT TTAGCCGCCG CTGAAGTGAT TGTTGAAGAA
GTTGAAGGTA ACCCTGGTTA CTATCAGGCT AAATTCTTCT TACGCCCTCA TTTCCAGTTA
GAAGGTTTGA CAGTATCCCT GCGTATGGTT GCTAAACTGC CTTCGCTGAA AGACGTAGCA
TAA
 
Protein sequence
MSTQDAKTKQ ATVASATEYS DFNTLLTKEF KAKSEQTIAA VEGAVKTLAE QALANSVTVS 
DDAYKSIASI IAEIDRKLSD QINLILHHQE FQSLESAWRG LHYLVNNTET DEKLRLRFLD
ISKDELRRNM KRYKGVAWDQ SPLFKKIYEE EYGQLGGEPY GCLVADYYFD HTAPDVDLLA
SIGKVAASAH VPFITGAAPS VLQMESWQEL SNPRDLTKIF TQNLEYAAWN SLRQSEDSRY
IGLAMPRFLS RLPYGINTNP VDAFHFEETT DGADHSKYVW SNAAYAMAVN INRSFKEYGW
CTLIRGVESG GVVEGLPCHT FPTDDGGIDM KCPTEIAISD RREAELAKNG FIPLVHRKNT
DYAAFIGAQS LQKPAEYYDS DATANANLSA RLPYLFACSR FAHYLKCIVR DKIGSFKERD
EMQRWLNDWV MNYVDGDPAN SSLETKARRP LAAAEVIVEE VEGNPGYYQA KFFLRPHFQL
EGLTVSLRMV AKLPSLKDVA