Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2849 |
Symbol | rluE |
ID | 5801321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 2990182 |
End bp | 2990808 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641340701 |
Product | ribosomal large subunit pseudouridine synthase E |
Protein accession | YP_001607231 |
Protein GI | 162418698 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.403146 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAT TCTCTGTTAA AAATCACAAA GTTAACCGAT TCAGCACTAA GGCACAAGCC AGGCAGTCCC CCCCCGCTGC GCCACGGCGG GTATTGTTAT TCAATAAACC TTTTGATGTA TTACCGCAAT TCACTGATGA GTCTGGACGC ACCACTTTGC AGGGTTTCAT CCCTTTTAAG GACGTTTATG CTGCTGGCCG GTTAGATCGC GATAGCGAGG GCTTATTGGT ATTAACCAAT GATGGCAAGT TGCAAGCCAG GCTCACGCAA CCGGCGCAAA AAACAGGTAA AGTCTATTTT GTACAAGTAG AAGGGGTCCC TGACAACGAT GCGCTCACAC AGCTAAAACG AGGCGTAACG TTGAAAGATG GCCTGACGTT ACCCGCAGGC GCGGAGTTAG TGGCAGAGCC TGAGTGGCTA TGGCCGCGCC ATCCCCCTAT CAGAGAGCGT AAAACCATCC CGACCAGTTG GTTGAAAATA ACACTTTATG AAGGCCGCAA CCGGCAAGTA CGTAGAATGA CCGCACACGT TGGCTTCCCT ACCCTGCGCC TGATTCGTTT TAGTATGGGA AATTTAAGCC TTGGCAACTT ACAGCCCGGC GAATGGAAGG AGATAACTGA TGTTTAA
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Protein sequence | MNKFSVKNHK VNRFSTKAQA RQSPPAAPRR VLLFNKPFDV LPQFTDESGR TTLQGFIPFK DVYAAGRLDR DSEGLLVLTN DGKLQARLTQ PAQKTGKVYF VQVEGVPDND ALTQLKRGVT LKDGLTLPAG AELVAEPEWL WPRHPPIRER KTIPTSWLKI TLYEGRNRQV RRMTAHVGFP TLRLIRFSMG NLSLGNLQPG EWKEITDV
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