Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2848 |
Symbol | icd |
ID | 5801320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 2988798 |
End bp | 2990051 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641340700 |
Product | isocitrate dehydrogenase |
Protein accession | YP_001607230 |
Protein GI | 162419926 |
COG category | [C] Energy production and conversion |
COG ID | [COG0538] Isocitrate dehydrogenases |
TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.476023 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGCA AAGTAGTTGT TCCGGCAGAA GGTAAGAAAA TTACTGTCGA TGCTCAGGGT AAACTGGTTG TTCCGCATAA TCCGATCATT CCATTTATTG AAGGTGACGG TATTGGTGTT GATGTAACCC CGGCGATGAT CAACGTGGTA GATGCTGCGG TTAAGAAAGC TTATAACGGT GAACGTAAAA TTTCCTGGAT GGAAATTTAC ACTGGTGAGA AATCAACCCA TGTCTATGGT AAAGATGTTT GGTTGCCAGA AGAAACCTTA GATCTGATCC GTGATTATCG CGTTGCTATC AAAGGCCCGT TGACCACTCC TGTCGGTGGC GGCATCCGTT CTTTGAACGT TGCTCTGCGT CAACAACTTG ACCTGTATGT GTGTCTGCGT CCGGTGCGTT ATTATGAAGG CACCCCAAGC CCGGTAAAAC ACCCTGAACT GACCAACATG GTGATTTTCC GTGAAAACGC TGAAGATATC TATGCGGGTA TCGAATGGAA AGCGGGTTCA CCCGAAGCAG AGAAAGTGAT CAAGTTCCTG CGTGAAGAGA TGGGTGTGAA GAAAATCCGT TTCCCTGAAC AATGTGGTAT CGGTGTGAAA CCGTGTTCAG AAGAAGGGAC TAAGCGTTTG GTACGTGCAG CGATTGAATA TGCAATTACC AACGATCGTG AATCAGTTAC GCTGGTTCAT AAAGGCAATA TTATGAAATT CACCGAAGGC GCGTTTAAAG ACTGGGGTTA TCAGTTAGCG CGTGAGGAAT TTGGTGGTGA ACTGATCGAC GGTGGCCCAT GGGTTAAAAT CAAAAACCCA AATAACGGCA AAGAAATTAT CGTTAAAGAT GTGATTGCCG ATGCTTTCCT GCAACAGATC CTGCTGCGTC CTGCGGAATA TGATGTTATC GCTTGTATGA ACCTGAACGG TGATTACATC TCTGATGCAT TGGCAGCTCA GGTTGGCGGT ATTGGTATTG CTCCGGGGGC TAACATTGGT GATGACTGCG CACTGTTCGA AGCCACTCAC GGTACTGCAC CAAAATATGC TGGTCAGGAT AAAGTGAACC CAGGTTCTAT TATTCTTTCA GCAGAAATGA TGCTGCGTCA CATGGGCTGG TTTGAAGCCG CTGACTTAAT CATTAAAGGC ACTGAAGGCG CAATTCAAGC CAAGACCGTG ACTTATGATT TCGAACGTCT GATGGAAGGC GCTAAGTTGT TGAAGTGTAG TGAGTTTGGC GACGCCATTA TTAAGCACAT GTAG
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Protein sequence | MESKVVVPAE GKKITVDAQG KLVVPHNPII PFIEGDGIGV DVTPAMINVV DAAVKKAYNG ERKISWMEIY TGEKSTHVYG KDVWLPEETL DLIRDYRVAI KGPLTTPVGG GIRSLNVALR QQLDLYVCLR PVRYYEGTPS PVKHPELTNM VIFRENAEDI YAGIEWKAGS PEAEKVIKFL REEMGVKKIR FPEQCGIGVK PCSEEGTKRL VRAAIEYAIT NDRESVTLVH KGNIMKFTEG AFKDWGYQLA REEFGGELID GGPWVKIKNP NNGKEIIVKD VIADAFLQQI LLRPAEYDVI ACMNLNGDYI SDALAAQVGG IGIAPGANIG DDCALFEATH GTAPKYAGQD KVNPGSIILS AEMMLRHMGW FEAADLIIKG TEGAIQAKTV TYDFERLMEG AKLLKCSEFG DAIIKHM
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