Gene YpAngola_A2744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2744 
SymbolligA 
ID5801216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2867967 
End bp2869979 
Gene Length2013 bp 
Protein Length670 aa 
Translation table11 
GC content51% 
IMG OID641340604 
ProductNAD-dependent DNA ligase LigA 
Protein accessionYP_001607138 
Protein GI162420672 
COG category[L] Replication, recombination and repair 
COG ID[COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) 
TIGRFAM ID[TIGR00575] DNA ligase, NAD-dependent
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000148607 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCGA TAATCCAACA AATTAATCAA CTAAGAACTT CATTGCGCCA TCATGAACAT 
CAATACCATG TGCTGGATGC CCCCGAAATC CCTGATGCTG AATACGACCG TATGATGCAA
CAACTGCGTG ATTTAGAAGC ACAACATCCT GAACTGGTGA CTAATGACTC ACCGACGCAA
CGGGTTGGTG CCGCGCCTCT TGATGCCTTT GAACAGGTGA AGCACGAAGT ACCGATGCTG
TCTCTTGATA ATGTGTTTGA TGAAGAAAGT TATCTGGCCT TCGATAAACG GGTACATGAC
CGGCTTAAAA CGGCAGAACC ACTGACATTT TGTTGTGAAC TGAAGCTAGA TGGTCTGGCG
GTCAGTTTAT TGTATGAAAA TGGTGAATTG GTGAGAGCCG CGACACGTGG TGATGGCACT
ACGGGAGAAA ATATTACCGC TAATGTGCGT ACTATTCGTG CCATTCCACT GCGCCTACAT
GGGGATAATG TCCCGCGGCG CGTAGAAGTC CGTGGCGAGG TTTTTATGCC ACAAGCCGGT
TTTGAACAGC TTAACGAAGA GGCTCGTCGC AAAGGAGGGA AGGTCTTTGC CAACCCACGG
AATGCGGCGG CGGGATCGTT ACGCCAACTT GATCCCCGTA TTACAGCCAA ACGGCCACTC
ACCTTCTTCT GCTATGGTGT CGGTCTGCTG GATGGCGGCG AGCTACCCCG TAGCCATATT
CAGTGTCTGA TGCAATTTAA GGCATGGGGG TTACCCGTGA GTGAGCGGGT GAAACTCTGC
ACTGGCAGTG ATCAGGTTAT TGCTTTTTAT CGTCAAATAG AGCAAGACCG CGCAGGCTTG
GGCTTTGATA TTGATGGTGT GGTGATCAAA GTTGATGATC TTGCTTTGCA GGAGCAATTG
GGGTTTGTTG CGCGTGCCCC TCGCTGGGCG ACGGCATTTA AATTCCCGGC GCAGGAACAG
ATCACACAGG TCCGTGAAGT GGAATTTCAA GTGGGTCGTA CCGGTGCCAT TACTCCCGTA
GCCCGTCTGG AGCCGGTTCA GGTGGCTGGC GTGATTGTCA GTAATGCGAC ATTGCACAAT
GCCGATGAAA TCGAACGCCT TGGTTTGCGT ATTGGCGATA CGGTCATTGT GCGCCGTGCG
GGTGATGTGA TCCCACAAGT TGTTGGTGTG GTCATGGAAC AACGCCCTGA TGATACGAAG
GAGATCACTT TCCCAAGCCA ATGCCCAGTG TGTGGCTCCG ATATTGAACG GGTGGAAGGG
GAGGCTGTTG CCCGCTGCAC TGGCGGCTTG TTCTGTGCTG CACAGCGTAA AGAGGCACTT
AAACATTTTG TCTCCCGGCG AGCACTGGAT GTAGACGGTA TGGGCGATAA AATTATCGAA
CAACTGGTCG AGAAACAGTA TGTTGAAAAT CCAGCTGATT TATTCCAACT GACCGCAGGT
AAGTTGACGG GGTTAGATCG GATGGGGCCA AAGTCTGCGC AAAATCTGAT TGCGGCGCTG
GAGAAGGCCA AACAGACCAC CTTTGCACGC TTCTTGTATG CCTTGGGGAT CCGCGAAGTG
GGCGAAGCGA CGGCCGCAAA TTTAGCCGCT CACTTCCGCA CTCTGGATAA TCTGCGTGCA
GCAGATATTG AGACGTTAAA AAGTGTGCCG GATGTCGGCG AGGTGGTGGC TAAACATGTG
ATGAACTTCC TCAGTGAGGA ACATAATCAG AAAGTCATCG AAGAACTGGA GAAAGTGGTC
AGTTGGCCTG AGCCGCAGCA AATTGTAGTC GAGGAGAGCG ATAGCCCCTT CGCTGGAAAA
ACGGTGGTCC TGACGGGGTC ATTGACGATC CTTTCACGGG ATGAAGCGAA AGACCGCCTG
ACAGCATTAG GCGCAAAAGT GAGTGGCAGT GTCTCTAAAA AAACGCATCT GGTGATCGCT
GGCGAGGCGG CTGGTTCTAA ACTGGCGAAA GCGCAGGAAC TCGGAATTAA AGTTATTGAT
GAAGCTGAAA TGATCCGTTT GCTGGGTGAA TAA
 
Protein sequence
MESIIQQINQ LRTSLRHHEH QYHVLDAPEI PDAEYDRMMQ QLRDLEAQHP ELVTNDSPTQ 
RVGAAPLDAF EQVKHEVPML SLDNVFDEES YLAFDKRVHD RLKTAEPLTF CCELKLDGLA
VSLLYENGEL VRAATRGDGT TGENITANVR TIRAIPLRLH GDNVPRRVEV RGEVFMPQAG
FEQLNEEARR KGGKVFANPR NAAAGSLRQL DPRITAKRPL TFFCYGVGLL DGGELPRSHI
QCLMQFKAWG LPVSERVKLC TGSDQVIAFY RQIEQDRAGL GFDIDGVVIK VDDLALQEQL
GFVARAPRWA TAFKFPAQEQ ITQVREVEFQ VGRTGAITPV ARLEPVQVAG VIVSNATLHN
ADEIERLGLR IGDTVIVRRA GDVIPQVVGV VMEQRPDDTK EITFPSQCPV CGSDIERVEG
EAVARCTGGL FCAAQRKEAL KHFVSRRALD VDGMGDKIIE QLVEKQYVEN PADLFQLTAG
KLTGLDRMGP KSAQNLIAAL EKAKQTTFAR FLYALGIREV GEATAANLAA HFRTLDNLRA
ADIETLKSVP DVGEVVAKHV MNFLSEEHNQ KVIEELEKVV SWPEPQQIVV EESDSPFAGK
TVVLTGSLTI LSRDEAKDRL TALGAKVSGS VSKKTHLVIA GEAAGSKLAK AQELGIKVID
EAEMIRLLGE