Gene YpAngola_A2695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2695 
Symbol 
ID5801167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2819787 
End bp2820332 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content44% 
IMG OID641340557 
Productfrimbrial protein 
Protein accessionYP_001607095 
Protein GI162420627 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0590722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.003545 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGTAAAT TAAATCTTGC TGTATGTGCA GTGGCTCTGT CTGTTATCTC TTCAACTTCT 
TATGCTGCTG CTGGCGGTAC TGTTACGTTC AACGGTAAAT TGATTGCTGA TACTTGTCAG
GTTGATACCG CAAGCGAGAA TATCACGGTA ACACTGCCTA CTCTTTCTAT CCAGTCTTTG
GCTGTAGCTG AAGCTCAAGA TGGTTCTAAG GACTTTGAAA TCAAAGTTCT GGATTGCCCG
GCAACACTGA CTCAAGTCGG TGCCCATTTT AATGCGATTG ATAGCTCTGG TGTTAATCCG
GCAACCGGTA ACTTGGTGAA CAAAGCACCA ACTGATGCTG CGGGTAATGT TGAAGTGCGT
TTGTACAACG TTGATGACAG CAGCCAGATC CGTGTAGGTT CAACGGGTAA CATGGTCAAC
ATCGTCAAAG TAGGTGCTAC ACCAGGTACA GCTAATCTGA CCTATGCTGG TGGTTATTAT
GCAACAGATG CAACTACCCC AGGTGAAGTG AATGCTAAAG TTGAATACGT TTTAGCTTAT
AACTAA
 
Protein sequence
MRKLNLAVCA VALSVISSTS YAAAGGTVTF NGKLIADTCQ VDTASENITV TLPTLSIQSL 
AVAEAQDGSK DFEIKVLDCP ATLTQVGAHF NAIDSSGVNP ATGNLVNKAP TDAAGNVEVR
LYNVDDSSQI RVGSTGNMVN IVKVGATPGT ANLTYAGGYY ATDATTPGEV NAKVEYVLAY
N