Gene YpAngola_A2655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2655 
Symbol 
ID5801127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2777525 
End bp2778892 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content51% 
IMG OID641340522 
Productmajor facilitator transporter 
Protein accessionYP_001607061 
Protein GI162419800 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0128885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCAT CAACAAGTGA TGGCTTACCT GTACCTCAAC GCTATGCCGC GATACTGGTT 
ATTGCTTTAG GTATTATGAT GGCGGTATTG GACGGCACTA TTGCCAACGT GGCATTACCG
ACTATCGCAC GTGACCTCAA TACCAGCCCA GCGACATCTA TCTGGGTTGT CAATGCTTAT
CAGCTCGCCA TCACCATCTC ACTGCTTTCC ATGGCGTCAT TGGGCGATAT CATTGGTTAC
CGGCGGGTTT ATCAAGCTGG CTTACTGATA TTCAGCGTGA CCTCACTGTT TTGTGCTCTG
TCCGATTCGT TATGGACCCT GACGTTTGCC CGTGTGCTAC AAGGGTTTGG CGCGGCGGCA
TTGATGAGCG TCAATACCGC CCTGATTCGT ATCATTTATC CTCGAGCCCA ACTTGGTCGA
GGTATTGGTA TCAATACCTT GATTGTTGCT GTGTCTTCAG CCGCGGGGCC CAGTATTGCC
GCTGCCGTGT TGTCTGTCGC CTCTTGGCAA TGGCTGTTCG CCCTCAACGT GCCAATTGGG
CTATTAGCGT GGTGTTTAGG TATAAAATTC CTACCCGCCA ATAATACGAA AAGCAACGGC
AATCGCTTTG ATATCACCAG TTGTGTTCTG AATGCGCTGA CATTTGGCTT ATTGATCACC
GCAATCAGTG GTTTTTCCCA AGGGCAAAGC CCGGCAGTGA TTGCTGCTCA AGTGGTTGCC
CTATTACTGA TTGGTTTCTT CTTTGTGCGT CGTCAACTCA CGCAATCCTT CCCACTGCTC
CCCGTGGATT TACTGCGTAT TCCTATTTTC GCGTTGTCGA TTGGCACTTC AATTTTTTCT
TTTGCCGCTC AAATGCTGGC AATGGTGTCG CTTCCCTTCT TTTTACAGAC CGTATTGGGC
CGCGACGAAG TGGCAACCGG GCTACTGTTG ACTCCATGGC CGTTGGCCAC CATGGTCATT
GCTCCGATCG CGGGGCGTTT GGTTGAGCGC TATCATGCAG GTTTATTAGG TGGGATTGGT
CTGGCTGTTT TTGCCAGTGG TCTATTCTTG CTGGCGGTGT TACCCGCCAA CCCCAGCGAC
GTAGATATTA TCTGGCGGAT GATACTGTGT GGCGCGGGTT TTGGGCTGTT CCAGACCCCA
AATAATCATA CGATCATTTC TGCCGCTCCA CAGCATCGTA GCGGCGGAGC CAGTGGCATG
TTGGGGACCG CCCGCTTGCT AGGACAGACC TCAGGTGCTG CCTTGGTTGC GCTAATGTTC
AATATGTTCT CAACCAACGG CACCCACGCC TCCTTGATAC TGGCTGGCTG TTTTGCCAGT
ATCGCGGCAC TGGTGAGTCT CTTACGTGTA ACACAAAAAA GTCATTAG
 
Protein sequence
MNPSTSDGLP VPQRYAAILV IALGIMMAVL DGTIANVALP TIARDLNTSP ATSIWVVNAY 
QLAITISLLS MASLGDIIGY RRVYQAGLLI FSVTSLFCAL SDSLWTLTFA RVLQGFGAAA
LMSVNTALIR IIYPRAQLGR GIGINTLIVA VSSAAGPSIA AAVLSVASWQ WLFALNVPIG
LLAWCLGIKF LPANNTKSNG NRFDITSCVL NALTFGLLIT AISGFSQGQS PAVIAAQVVA
LLLIGFFFVR RQLTQSFPLL PVDLLRIPIF ALSIGTSIFS FAAQMLAMVS LPFFLQTVLG
RDEVATGLLL TPWPLATMVI APIAGRLVER YHAGLLGGIG LAVFASGLFL LAVLPANPSD
VDIIWRMILC GAGFGLFQTP NNHTIISAAP QHRSGGASGM LGTARLLGQT SGAALVALMF
NMFSTNGTHA SLILAGCFAS IAALVSLLRV TQKSH