Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2654 |
Symbol | ogl |
ID | 5801126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 2776051 |
End bp | 2777217 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641340521 |
Product | oligogalacturonate lyase |
Protein accession | YP_001607060 |
Protein GI | 162418416 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.619254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0112854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAG GTAAACAAAT CCCCCTGACA TATCACACTT ATCAGGATGC CTCTACCGGC GCACAAGTGA CCCGACTGAC GCCCCCTGAT GTCACTTGTC ACCGTAACTA TTTCTATCAG AAATGTTTCA CCCGTGATGG TAGTAAACTG TTGTTCGGTG GTGCTTTTGA TGGCCCATGG AATTACTATT TACTGGATCT TAACAGCCGG GTCGCAACAC AACTGACTGA AGGGCGCGGT GATAATACCT TTGGGGGTTT CCTCTCACCA GAAGATGATG CGCTGTTCTA CGTGAAGGAT GGCCGTAATT TGATGCGTGT TGATCTCGCC ACATTAGAAG AGAACGTGGT TTATCAGGTG CCAGAAGAGT GGGTCGGTTA TGGAACGTGG GTAGCAAATT CTGATTGTAC TAAATTGGTC GGTATTGAGA TTAAGCGGGA AGACTGGCAA CCGTTGACAG ATTGGAAGAA ATTCCACGAA TTTTATTTCA CCAAACCGTG TTGCCGCCTG ATGCGCGTTG ATTTGAAAAC TGGCGAATCA GCGGTTATCC TGCAAGAAAA TCAGTGGCTT GGTCACCCTA TTTATCGCCC TTATGACGAT AGCACCGTGG CGTTCTGCCA TGAAGGGCCA CACGATCTGG TTGATGCACG TATGTGGCTC ATCAATGAAG ATGGCAGCAA TATGCGTAAA GTGAAAACCC ATGCAGAAGG TGAGAGCTGT ACGCATGAAG TCTGGGTTCC AGATGGTTCA GCATTGGTTT ATGTCTCTTA TTTGAAAGGC AGCTCCGATC GTTTTATTTA TAGTGCTGAT CCAGTGACAT TGAAAAATCG TCAATTGACT TCTATGCCTG CCTGCTCACA TTTAATGAGT AATTATGATG GCACACTGAT GGTAGGTGAT GGGTCTGACG CACCGGTTGA TGTGCAAGAT AACAGCGGTT ATAAGATCGA AAATGATCCT TTCTTGTATG TCTTCAATAT AAAGAATGGG ACACAGCATC GTATTGCTCG ACATGATACA TCATGGCAGG TATTTGAAGG TGATCGCCAG GTTACGCATC CTCATCCTTC TTTTACGCCT GATGATAAGC AGGTCCTGTT TACGTCAGAC GTCCACGGCA AGCCCGCATT ATATATGGTG ACATTGCCTG AGTCTGTTTG GCAATAG
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Protein sequence | MAKGKQIPLT YHTYQDASTG AQVTRLTPPD VTCHRNYFYQ KCFTRDGSKL LFGGAFDGPW NYYLLDLNSR VATQLTEGRG DNTFGGFLSP EDDALFYVKD GRNLMRVDLA TLEENVVYQV PEEWVGYGTW VANSDCTKLV GIEIKREDWQ PLTDWKKFHE FYFTKPCCRL MRVDLKTGES AVILQENQWL GHPIYRPYDD STVAFCHEGP HDLVDARMWL INEDGSNMRK VKTHAEGESC THEVWVPDGS ALVYVSYLKG SSDRFIYSAD PVTLKNRQLT SMPACSHLMS NYDGTLMVGD GSDAPVDVQD NSGYKIENDP FLYVFNIKNG TQHRIARHDT SWQVFEGDRQ VTHPHPSFTP DDKQVLFTSD VHGKPALYMV TLPESVWQ
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