Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2629 |
Symbol | |
ID | 5801101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 2752411 |
End bp | 2753049 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641340497 |
Product | transglycosylase slt family protein |
Protein accession | YP_001607036 |
Protein GI | 162420314 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00160181 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATTT TATTGTTGGC GGGGTGTGCT AAACAAACCC CACCACCACA AGCGAATAAC GGGTGGCTGA AAAAAACGCC ACAGGGCAAT TCTCTTAACG TAGCGAAAAG CAGTGCCGGT TCAACTACCG TTGCTTATAG CGACGTCATT AAACAAGCCG CGAGCCATTA CGGCGTTGAT GAAACACTGA TTAAAGCGAT TATCCAGGTG GAATCTGGTT ACAACCCGGA TGTTGTGAGT AGATCCAATG CCGTAGGCTT GATGCAGATT AAAGCCTCTA CCGCCGGGCG TGATGCGTAC CGGATGAAAG GGCGAAATGG TCAACCGAGC TCTCGTGAGC TAAAAGATCC AGTGAAGAAT ATTGATATTG GTGCTGCTTA TATCAACATT CTACAAAATC AGCAGTTAGC GGGGATCAAC GACCCGCAGA CATTACGTTA TGCCACCATC GTTTCTTATG CGAATGGCGC GGGGGCTATG TTGCGGACTT TTTCATCAGA TAAACGTCTG GCAGTCAATA AAATTAATAG TCTTAGCCCA AACGAATTTT ATCAGCATAT ACAAAAGAAG CACCCGGCTG CACAGGCTCC ACGTTACTTG TGGAAGGTGG ATACCGCTTA CCGGGCGATG TCAGAGTAA
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Protein sequence | MAILLLAGCA KQTPPPQANN GWLKKTPQGN SLNVAKSSAG STTVAYSDVI KQAASHYGVD ETLIKAIIQV ESGYNPDVVS RSNAVGLMQI KASTAGRDAY RMKGRNGQPS SRELKDPVKN IDIGAAYINI LQNQQLAGIN DPQTLRYATI VSYANGAGAM LRTFSSDKRL AVNKINSLSP NEFYQHIQKK HPAAQAPRYL WKVDTAYRAM SE
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