Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2574 |
Symbol | |
ID | 5801045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 2693717 |
End bp | 2694919 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641340443 |
Product | inner membrane transport protein YdhC |
Protein accession | YP_001606985 |
Protein GI | 162419019 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.723156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGT CATCCAGTTT CATGTTCTAT CTGGCCGGCC TGAGTATGCT GGGTTATTTG GCCACAGACA TGTATCTCCC CGCCTTCGGT GCAATGCAAC GCGAACTGCA AACCACCGCC GGTGCCATCA GCGCCAGTTT AAGTATTTTT CTGGCCGGTT TTGCCATAGC ACAGCTTATC TGGGGGCCCC TTTCAGACAA ATTGGGCCGC AAGCCTGTCC TGTTAGCGGG TTTGGGGTTA TTTGCCATCG GTTGCTTAGG GATGTTATGG GTTGAAAATG CCACTCAATT GTTGGTTCTA CGCTTCATAC AAGCCGTGGG CGTCTGTTCA GCGGTGGTGA GCTGGCAGGC TTTAGTGGTA GACCGCTATC GCGACGGGAA GGCCAACCGC GTGTTTGCCA CCATAATGCC GCTGGTTGCC TTATCACCCG CATTAGCGCC GTTATTAGGT GCCTGGTTAC TGAACCACTT CAGTTGGCGG TCAATTTTTG TAGTTCTATT AGCCATTACA CTGCTCTTAC TGATCCCGAC AATGGTGCTG CAAGAAAGGA AAAAAGCACG CGCCGATAAC AGCGATCAAC CTAAAAACAC GGTGAGTTTC TGGCAACTGC TCCAATCACC CACATTCAGT GGCAACGTCA TGATCTTTGC TGCCTGTAGT GCTGGCTTCT TTGCTTGGCT AACGGGTTCA CCTTTCATTC TGGAAAATAT GGGGTACAGC CCAAATGTTA TTGGCTTGAG TTATGTCCCA CAGACGCTGG CTTTTCTGCT TGGTGGATTT GGTTGCCGCA GTGCACTTGC CCACATAAAA GGGAACACCC TGCTACCCTG GCTGTTAGTG GGCTATGCTG GCAGCATGAT TGCCCTGTAC TTGATCGCCA CCTTAACAAC GCCATCATTG CTCACGTTGC TTATCCCTTT CTGCTTAATG GCGCTTGTGA ATGGTGCCTG CTACCCTATT ATCGTAGCGA ATGCATTAAT GCCGTTTCCA GACAATACCG GCAAAGCGGC GGCCTTGCAG AATACCCTGC AACTCGGTTT GTGCTTTGTG GCCAGTATGT TGGTATCGGC CTATATCAGC CAGCCGCTCT TAGCGACAGT GACAGTGATG CTATTGACGG TAGTTTTGGC GGCTTTGGGT TACGGCATCC ATTGTTACGC GTTACGTAAA GACAAAACCA GATTGATGAC TCGGACACCA TAA
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Protein sequence | MKTSSSFMFY LAGLSMLGYL ATDMYLPAFG AMQRELQTTA GAISASLSIF LAGFAIAQLI WGPLSDKLGR KPVLLAGLGL FAIGCLGMLW VENATQLLVL RFIQAVGVCS AVVSWQALVV DRYRDGKANR VFATIMPLVA LSPALAPLLG AWLLNHFSWR SIFVVLLAIT LLLLIPTMVL QERKKARADN SDQPKNTVSF WQLLQSPTFS GNVMIFAACS AGFFAWLTGS PFILENMGYS PNVIGLSYVP QTLAFLLGGF GCRSALAHIK GNTLLPWLLV GYAGSMIALY LIATLTTPSL LTLLIPFCLM ALVNGACYPI IVANALMPFP DNTGKAAALQ NTLQLGLCFV ASMLVSAYIS QPLLATVTVM LLTVVLAALG YGIHCYALRK DKTRLMTRTP
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