| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A2568 |
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| Symbol | rnt |
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| ID | 5801039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 2687268 |
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| End bp | 2687948 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641340437 |
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| Product | ribonuclease T |
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| Protein accession | YP_001606979 |
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| Protein GI | 162420848 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000324213 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACGCTG AATTCGATAA AGATAAGAAA CTGATGGCAG ACAAAAGTGA CCTTAACGCC
CTGAGTGGCC GTTTTCGTGG GTATTACCCA GTAGTAATTG ATGTAGAAAC CGCAGGTTTT
AATGCCCAAA GTGATGCATT ACTCGAGATT GCCGCAGTAA CCTTGCAGAT GAATAAAGAG
GGCTGGCTGC TACCTGATGA AACGTTGCAC TTCCATGTGG AACCTTTCGA AGGTGCCAAC
CTGCAGCCAG AGGCGCTGGC CTTTAATGGG ATCGATCCAA CAAATCCTCT ACGCGGTGCC
GTCAGCGAAC ATGATGCCTT GCATGCCATT TTTAAAGCCG TGCGTAAGGG AATCAAAGAT
AAAGGCTGTA ACCGGGCCAT AATCGTGGCA CACAATGCCA ATTTTGATCA CAGCTTTGTT
ATGGCTGCCG CTGAACGTGC CAGCTTGAAG CGGAACCCGT TCCACCCGTT TGCCACTTTC
GATACCGCCG CTCTCAGTGG GTTGGTATTG GGGCAAACCG TGCTGGCAAA AGCTTGCCTG
GCCGCAGGTA TCCCGTTTGA CAGTAGTCAG GCGCACTCTG CATTGTACGA CACCCTGCAA
ACGGCGAAAC TATTTTGTGA GTTGGTTAAT CGCTGGAAAA AACTGGGTGG CTGGCCGTTG
CCAGCGGCAG AATCGGGGTA A
|
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| Protein sequence | MHAEFDKDKK LMADKSDLNA LSGRFRGYYP VVIDVETAGF NAQSDALLEI AAVTLQMNKE
GWLLPDETLH FHVEPFEGAN LQPEALAFNG IDPTNPLRGA VSEHDALHAI FKAVRKGIKD
KGCNRAIIVA HNANFDHSFV MAAAERASLK RNPFHPFATF DTAALSGLVL GQTVLAKACL
AAGIPFDSSQ AHSALYDTLQ TAKLFCELVN RWKKLGGWPL PAAESG
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