| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A2541 |
|---|
| Symbol | sapB |
|---|
| ID | 5801012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 2659403 |
|---|
| End bp | 2660368 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641340411 |
|---|
| Product | peptide transport system permease |
|---|
| Protein accession | YP_001606953 |
|---|
| Protein GI | 162418623 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG4168] ABC-type antimicrobial peptide transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTATTT TCACATTACG GCGATTATTA CTGCTCGTGA TAACCCTGTT TATGTTGTCA
TTAGTCAGCT TTAGCCTGAG CTATTTTACC CCCTATGCAC CGTTACATGG GGCCGGGTTG
CTGGATGCCT ACCGCTTCTA TTTCAGTAGC TTGTTGCAAT GGGATTTTGG CATTTCCAGC
ATTAATGGCC AACCAATCAG CGAGCAACTG CGAGAAGCCT TTCCCGCAAC CATGGAATTA
TGTGTACTGG CCTTTGGCCT CGCGCTGTTT ATCGGTATTC CGCTGGGCAT TATTGCCGGT
GTAATGCGGG GTAAATGGGC GGATATCGCC ATCAGTACCG TGGCGTTAAT CGGCTTCTCG
ATCCCCGTAT TTTGGCTGGC CCTGTTACTG ATGTTGTTCT TTTCTCTGCA TCTGGGGTGG
TTACCGGTTT CTGGCCGTTT TGACTTGCTT TATCAAGTAA AACCAGTGAC GGGGCTGGCA
TTGGTCGATG CCTGGCTATC GCCCTCACCT TACCGCAACG AAATGATGCT CAGTGCACTT
CAACATATGA TCCTACCAAT CACCGCACTG GCCGTGGCAC CAACAACCGA GGTCATCCGC
TTGATGCGTA CCAGCACCGA CGACGTTATC GGGCAGAACT ACATTAAAGC CGCCGCAACC
CGTGGGCTAT CCCGCTTCAC TATTATCCGC CGCCATGTTT TGCATAATGC CTTGCCGCCA
ATTATTCCCA AATTGGGGTT GCAGTTCTCC ACCATGCTGA CACTGGCCAT GATCACCGAG
GTGGTCTTTA ACTGGCCAGG GTTAGGACGC TGGCTGATTA ATGCGATCCG CCAACAGGAC
TATGCCGCAA TCTCTGCGGG GGTGATGGTC GTGGGTTCGT TAGTGATCGT TATTAATGTG
CTGTCGGATA TTCTGGGTGC CATGATGACC CCGTTAAAGC ATAAGGAATG GTATGCCCTT
CGATAA
|
|---|
| Protein sequence | MIIFTLRRLL LLVITLFMLS LVSFSLSYFT PYAPLHGAGL LDAYRFYFSS LLQWDFGISS
INGQPISEQL REAFPATMEL CVLAFGLALF IGIPLGIIAG VMRGKWADIA ISTVALIGFS
IPVFWLALLL MLFFSLHLGW LPVSGRFDLL YQVKPVTGLA LVDAWLSPSP YRNEMMLSAL
QHMILPITAL AVAPTTEVIR LMRTSTDDVI GQNYIKAAAT RGLSRFTIIR RHVLHNALPP
IIPKLGLQFS TMLTLAMITE VVFNWPGLGR WLINAIRQQD YAAISAGVMV VGSLVIVINV
LSDILGAMMT PLKHKEWYAL R
|
|---|
| |