| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A2535 |
|---|
| Symbol | pspC |
|---|
| ID | 5801005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 2653785 |
|---|
| End bp | 2654144 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641340404 |
|---|
| Product | DNA-binding transcriptional activator PspC |
|---|
| Protein accession | YP_001606947 |
|---|
| Protein GI | 162418257 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR02978] phage shock protein C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAATG TGTTAGGCAG TAAAAAACTG TACCGGGTAC CGGAAGAGGG CATGATCAAA
GGGGTATGTG CCGGTCTGGC CCATTATTTT GATATTCCAG TACGGTTGGT TCGCGTGATA
ATGGTGTTAT CACTGTTTTT TGGCCTATTC GTGTTCACTG TTGCGGCCTA CATCATACTG
GCGTTTATGC TGGAGCCGGT ATCGGCAGCC AGTGTGACTA ACGATAATGA CGTCACACCG
CGCCAGTTAC TGGATCAATT GCAACACGAA TTGGCGCAGG GCGAGCAACA GCTACGTCAG
GTGGAACGCT ATGTGACCTC AGATACTTTC GGTGTCCGAA GCCGGTTCCG TCAGTTGTAG
|
|---|
| Protein sequence | MANVLGSKKL YRVPEEGMIK GVCAGLAHYF DIPVRLVRVI MVLSLFFGLF VFTVAAYIIL
AFMLEPVSAA SVTNDNDVTP RQLLDQLQHE LAQGEQQLRQ VERYVTSDTF GVRSRFRQL
|
|---|
| |