| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A2529 |
|---|
| Symbol | tyrR |
|---|
| ID | 5800999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 2648116 |
|---|
| End bp | 2649693 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641340398 |
|---|
| Product | DNA-binding transcriptional regulator TyrR |
|---|
| Protein accession | YP_001606941 |
|---|
| Protein GI | 162418821 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTGG AAGTTTTTTG CGAAGACCGG CTCGGTCTCA CCAGAGAGTT GCTTGATCTC
TTGGTATTAC GCAGCATTGA TTTACGGGGG ATCGAAATTG ATCCTATTGG TCGCATTTAC
CTGAATTTTT CCAGTCTGGA TTTCAGTATA TTCAGTGCAC TAATGATGGA GATTCGGCAT
ATTGATGGGG TAACAGATGT CCGTACCGTT TCCTTTATGC CATCAGAGCG CGAACACCGT
TCGTTGCGAG CGCTGCTGGA ATCTATGCCA GAACCGGTAT TCTCTATTGA TTTAAAAGGG
AACCTTGAGC TGTCTAACCC CGCAGCCCGG GCGCTATTCT CCCTCAGTGA AGAAAAAATT
CGCCATAAAA CGGCGGGCAG CCTGCTGGGT GGCTATAATT TTTCACGCTG GTTTGAAGGC
GGCGATACGG CCCCTCACAC TGAACGGGTA TTGATCAATA ATCAGGATTA CCTGATGGAG
ATTACACCGA TTAATCTCGA AGACGAAAAC CAGAAAAAAC AAACCGTTGG CGCGGTTGTG
ATGTTGAAAT CAACCGCACG CATGGGGCAG CAACTGCAAA CTTTATCGGT CAATGATGAT
ACCGAGTTTA GACAGATAGT GGCGGCCAGC ACGAAGATGC GCCAGGTTTT GGCTCAAGCC
CGAAAATTAG CCATGCTTGA TGCGCCGTTA TTGCTGGTGG GGGATACAGG GACCGGTAAA
GATCTGCTGG CTCGTGCCTG TCACTTGCGC AGTCCTCGGG GGAAAATGCC ATTTCTTGGT
CTGAATTGTG CTTCACTGCC AGATGAAGTG GTCGAGAGTG AATTATTCGG TTATGCGGCT
GGCGCGTACC CAAACGCTAT TGAAGGCAAA AAGGGCTTCT TCGAACAGGC AAATGGGGGT
TCGGTCCTGT TGGATGAAAT TGGTGAAATG TCACCTCGTA TGCAAATCAA ACTGTTGCGT
TTCCTTAATG ACGGAACATT CCGCCGTGTA GGCGAAGAAC ATGAAGTGCA TGTTGATGTG
CGTGTCATTT GTGCCACCCA AAAAAATCTG GTGGAGTTGG TGCAACGTGG GGAATTCCGT
GAAGACTTAT ATTATCGGCT GAATGTCCTG ACCATCACAT TACCGCCATT GCGTGAGCGT
CAGACCGATA TTATGCCATT GACTGAGTTG TTTGTAGCGC GATTCTCTGA TGAGCAAGGT
GTGCCGCGGC CAAAATTGTC ACCAGAGTTG GCCAGTTTCC TGACTCACTA CGGTTGGCCG
GGTAATGTGC GTCAGCTTAA AAATGCGATT TATCGTGCGC TCACTCAGTT GGAGGGGGCC
GAATTAAGGC CACAGGATAT CATCCTGCCG GAGTTTGAAA TTGAAGCCAC GTTGGGTGAT
GAAGTCCTTG ATGGTTCACT TGATGACATC AGTAAGCGGT TCGAACGTTC TGTGCTGACT
CGCCTTTATC GTAATTATCC CAGCACCCGT AAACTGGCTA AACGGCTAGG TGTTTCGCAT
ACTGCGATCG CCAATAAATT ACGGGAGTAT GGTTTAAGCA GTAAACGGCC CGCCAGTGAT
GAAAATGAAG AAGAATAA
|
|---|
| Protein sequence | MRLEVFCEDR LGLTRELLDL LVLRSIDLRG IEIDPIGRIY LNFSSLDFSI FSALMMEIRH
IDGVTDVRTV SFMPSEREHR SLRALLESMP EPVFSIDLKG NLELSNPAAR ALFSLSEEKI
RHKTAGSLLG GYNFSRWFEG GDTAPHTERV LINNQDYLME ITPINLEDEN QKKQTVGAVV
MLKSTARMGQ QLQTLSVNDD TEFRQIVAAS TKMRQVLAQA RKLAMLDAPL LLVGDTGTGK
DLLARACHLR SPRGKMPFLG LNCASLPDEV VESELFGYAA GAYPNAIEGK KGFFEQANGG
SVLLDEIGEM SPRMQIKLLR FLNDGTFRRV GEEHEVHVDV RVICATQKNL VELVQRGEFR
EDLYYRLNVL TITLPPLRER QTDIMPLTEL FVARFSDEQG VPRPKLSPEL ASFLTHYGWP
GNVRQLKNAI YRALTQLEGA ELRPQDIILP EFEIEATLGD EVLDGSLDDI SKRFERSVLT
RLYRNYPSTR KLAKRLGVSH TAIANKLREY GLSSKRPASD ENEEE
|
|---|
| |