Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2518 |
Symbol | astD |
ID | 5800988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 2635793 |
End bp | 2637310 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641340388 |
Product | succinylglutamic semialdehyde dehydrogenase |
Protein accession | YP_001606931 |
Protein GI | 162420077 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.661362 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGC ACGTCATGTT TAACGCGGTA TTGTCTAGCC ATCCGGCCCT GTTTATACAA GGTGAATGGC GCATCGGTAA CGGTGTGTCT TTCGAAAAAC AGGATCCTAT GAGTCAGCAG CGGCTATGGC AGGCGCGTGC AGCAGACCAT ACGGATGTGA CTCTGGCCTG CCATGCCGCA AGAGCGGCTT TTCCGGCATG GGCACGAGCT TCTCTTGAAC AGCGGGCCAC GGTGATACAG CAGTTTGCGG CCTTACTCGA ACAGCATAAA CAATCATTAG CGCGAACTAT CAGTCTGGAA ACCAGCAAGC CATATTGGGA GACGCTAACA GAGGTGCAGG CGATGATCGG CAAGGTGGCT ATCTCTTTGC AAGCCTATCA AACCCGCACC GGCCATAGCC AAACCCCAAT GGGGGACAGC ATGTCAGTGC TACGTCACCG GCCTCATGGC GTATTAGCTG TCTTTGGCCC CTATAATTTT CCAGGCCATT TGCCCAATGG TCATATTGTC CCGGCCTTGC TCGCGGGGAA TACCGTGGTA TTCAAACCCA GTGAATTGAC CCCATGGACC GCAGAAGAAA CCGTCAAATT GTGGCAACAG GCGGGGATTC CTGACGGCGT GCTTAATTTG GTGCAGGGCG GGCGTGAAAC GGGCGAGGCA TTGGCTGCCC AGCCTGATAT TGATGGCTTG TTGTTTACTG GCAGCGCCCA TACCGGCTAC CACTTACATC GTCAACTGGC GGGTCAGCCG GAAAAAATGC TGGCGCTGGA AATGGGCGGT AACAATGCAC TGATCGTTGA ACAGGTGAAA GACCGGGATG CGGTTGTCAA TCTTGCCATT CAATCTGCCT TTATTTCCGC CGGTCAGCGC TGTACCTGTT CACGTCGTTT GCTGGTTAAA ACCGGGGCTG AGGGCGATGC TTTTTTACTG CGCTTTACCG CCGTTGCGCA AGCATTGCGA ATTGGCCGCT GGGATGAGCA ACCGGCCCCC TTTATGGGTG CCGTCATTTC ATCTCAGGCG GCAGAACGGA TGTTGGCGGC TCAGCAACAT TTGCTGTTGT TAGGGGGGGA ATCATTATTA AACATGACTC GGCCAGATAG CCAAAGTGCG CTACTGACAC CGGGTATCAT TGATATTACC AATATCAGCG AGGTACCTGA CGAGGAGTAT TTTGGCCCAC TGGTCAGTGT GATCCGCTAC ACAGACTTTA CTGAGGCGCT GAAAATAGCC AATCAGACCC GATTTGGTCT GGCCGTCGGC TTGGTTTCTG AAGATCGCCA GCAATTTGAA CAATTGTTAC TGGAAGCCAG AGCAGGGATT GTTAACTGGA ACAAACCATT GACGGGGGCT TCCAGTGCTG CACCCTTTGG CGGTGTCGGG GCATCGGGTA ACCATCGGCC CAGCGCCTTT TATGCCGCAG ATTATTGTGC GTGGCCCATG GCATCACTGG AGTGTGAGCA CTTGACGTTA CCCGCAACAT TATCCCCCGG TATCTCTTTT GATTTGCCCA AGGTGTGA
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Protein sequence | MSQHVMFNAV LSSHPALFIQ GEWRIGNGVS FEKQDPMSQQ RLWQARAADH TDVTLACHAA RAAFPAWARA SLEQRATVIQ QFAALLEQHK QSLARTISLE TSKPYWETLT EVQAMIGKVA ISLQAYQTRT GHSQTPMGDS MSVLRHRPHG VLAVFGPYNF PGHLPNGHIV PALLAGNTVV FKPSELTPWT AEETVKLWQQ AGIPDGVLNL VQGGRETGEA LAAQPDIDGL LFTGSAHTGY HLHRQLAGQP EKMLALEMGG NNALIVEQVK DRDAVVNLAI QSAFISAGQR CTCSRRLLVK TGAEGDAFLL RFTAVAQALR IGRWDEQPAP FMGAVISSQA AERMLAAQQH LLLLGGESLL NMTRPDSQSA LLTPGIIDIT NISEVPDEEY FGPLVSVIRY TDFTEALKIA NQTRFGLAVG LVSEDRQQFE QLLLEARAGI VNWNKPLTGA SSAAPFGGVG ASGNHRPSAF YAADYCAWPM ASLECEHLTL PATLSPGISF DLPKV
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