Gene YpAngola_A2514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2514 
Symbol 
ID5800984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2631563 
End bp2632645 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content45% 
IMG OID641340384 
Productouter membrane protein N 
Protein accessionYP_001606927 
Protein GI162421805 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.127891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA TCGCGATGGC TTTGGCAGCC ACACTGGGTA TCATTCCAGC TCTTTCAAGT 
GCAGCGGAAA TTTATAATAA AGATGGCAAC AAGTTGGATT TTTATGGGCG GGTTGCTGCG
AAATACCTAT TTAAAAAACA GAGCAATGAA GATGCAACTT ATGTGCGTAT TGGTTTCAAG
GGTGAAACAA AAATAAATAG CCAGCTAACT GGTTTCGGTC AGTGGGAATA TAACATCGCA
GCTAACAACA CAGAATCTCA GGGTGATAAG GGCAATAAAA CCCGTTTGGG CTTTGCGGGT
CTGAAGTTAG CTGATTACGG GTCTTTCGAC TATGGCCGCA ACTATGGTGT TGTCTATGAC
GTGCTGTCCT ATACCGATAT GTTGCCTGAA TTTGGTGGTG ATTCCATGGC AGCGACGGAT
AATTACATGA CGGCCCGCTC TACTGGCCTG GCAACCTACC GTAACGATAA TTTCTTCGGA
CTTGTGGAGG GCTTAAAAGT TGCCGCTCAG TATCAGGGGC GTAACGAAGA CGGTGATGTT
ACCCGAAATG AACGTTCTAT CCAAAAGGCC AATGGTGATG GTTTCGGTTT GTCTTTTAAT
TATCAAAACA TTCAGGGCAG CGGCGTCAGT TTTGCAGGCG CATACTCATC ATCTAATCGT
ACCGAGGGCC AGAAAGAATT AGTGAACAGT GCTGCGGGTG ACAAAGCTCA AGCTTGGGCT
ACTGGGCTAA AATACGATGC CAATCAGGCC TATATTGCAG CAATGTATGG CGAAACACTA
AACATGACGC CGTACAAAAG ACTGATCGCG AACAAAACCC AAAACGTAGA GTTGGTCGCT
CAATACCAGT TTGAGAATGG TATCCGCCCG TCTCTTGCCT ACATACAATC TAAAGGTAAG
GATCTGGCGG GGGTCGGCGA TACGGATCTG GTGAAATATG CTGAAATCGG TGTGACTTAC
CATTTCAACA AGAACATGTA CACCTATGTT GATTATAAGA TTAATTTATT GGATAACGAT
AAGAACCCAT TGGGCTTGAA TACGGATGAT GTTGTTGCGG TAAACTTGAC TTACCGTTTT
TAA
 
Protein sequence
MKNIAMALAA TLGIIPALSS AAEIYNKDGN KLDFYGRVAA KYLFKKQSNE DATYVRIGFK 
GETKINSQLT GFGQWEYNIA ANNTESQGDK GNKTRLGFAG LKLADYGSFD YGRNYGVVYD
VLSYTDMLPE FGGDSMAATD NYMTARSTGL ATYRNDNFFG LVEGLKVAAQ YQGRNEDGDV
TRNERSIQKA NGDGFGLSFN YQNIQGSGVS FAGAYSSSNR TEGQKELVNS AAGDKAQAWA
TGLKYDANQA YIAAMYGETL NMTPYKRLIA NKTQNVELVA QYQFENGIRP SLAYIQSKGK
DLAGVGDTDL VKYAEIGVTY HFNKNMYTYV DYKINLLDND KNPLGLNTDD VVAVNLTYRF