Gene YpAngola_A2450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2450 
Symbol 
ID5800920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2568845 
End bp2569681 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content52% 
IMG OID641340325 
Productputative spermidine/putrescine ABC transporter permease 
Protein accessionYP_001606869 
Protein GI162420715 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA CCACCAATGG CCGCCTGGTG GTCACGATTT CGCTGGTTTT TTTCGCCATT 
GCCAATCTAC TGTGGCTGGG GTTACCGTTC GGTACGGCGA TCCTCTGGTC ACTGGTTGAC
CCTCAGTATC CCTGGAGCTA TCCAGATATT TTCCCACAGG TGCTATCATT TAACCGCTGG
CTGCTGGTCT GGGAAAAAAC CTCACTTTCC GAAGCACTGA TTAACAGTTA CACCATCGCG
CCCGTGGTGG CAGCCACCAG CCTACTGCTA TCGCTACCTA CCGCGTATGC CTTCGGGCGC
ATGAGATTTC GCGGCAAGGC AGTGGCGGAG ATGCTAACCC TGATCCCGCT AGTGATGCCG
GGAATGATTA TCGGTATCTT CTTCAGCGCC ATGCTAATGA ACCTCAATAT CAGCAACCCG
TTTTTCAGCA TCGTGTTGGG CCATACCGTG CTGACGCTAC CCTACTCCAT CCGCATTATG
TCCGCGGGGT TTAAGGCGGT ACCGCAGGAT CTGATCGATG CCAGCCGCGA TCTGGGTGCT
GGCATATGGG GCACCTTCTG CAACGCCTAC CTGCCGCTGC TAAAACCGAG TTTTTTGGCG
GCGCTGATTT TCTGCTTGGT GAAAAGTCTA GAAGAATTCA GCATCGCTTA TGTCCTTGGC
GCACCAGATT TTATTACCGT TCCGACCATT CTTTATTCCT TCCTCGGCTA CTCCTTTGTC
CGCCCAGATG CAGCGGTGGT ATCAATGATT CTGGTGATCC CCAATGTCAT TTTGATGATC
ATCATTGAGA AGCTTTTGAA GGGTAATTAT CTGTCACAGT CCACCGGGAA AGCCTGA
 
Protein sequence
MSRTTNGRLV VTISLVFFAI ANLLWLGLPF GTAILWSLVD PQYPWSYPDI FPQVLSFNRW 
LLVWEKTSLS EALINSYTIA PVVAATSLLL SLPTAYAFGR MRFRGKAVAE MLTLIPLVMP
GMIIGIFFSA MLMNLNISNP FFSIVLGHTV LTLPYSIRIM SAGFKAVPQD LIDASRDLGA
GIWGTFCNAY LPLLKPSFLA ALIFCLVKSL EEFSIAYVLG APDFITVPTI LYSFLGYSFV
RPDAAVVSMI LVIPNVILMI IIEKLLKGNY LSQSTGKA