Gene YpAngola_A2415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2415 
SymbolmsbB 
ID5800885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2531350 
End bp2532312 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content47% 
IMG OID641340294 
Productlipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 
Protein accessionYP_001606838 
Protein GI162421054 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02208] lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000861118 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAAG AAAAAAATGA CGCAACTGGT TTTATTCCGG TATTTCAGAA AACCTTCCTC 
CATCCGCGTT TCTGGGGGGT TTGGTTAGGT GCTGGAGCGA TTGCGGCGCT CGCTTATATT
CCACCCAAAT TCCGTGATCC TTTATTAGCT GGCATAGGGC GTCTCGCTGG GAAATTTGCT
AAAAGCGCCC GTCGTCGCGC TCGTATTAAT CTTCTTTATT GTATGCCTGA GTTACCCGAG
TCTGAACGCG AACACATTAT TGACCAGATG TTTGCTACCG CAGCTCAACC GTTAATGATG
ATGGCAGAAC TTTGTTTTCG TGATCCGAAA AAAGTGCTGA CTCGCGTGCA CTGGCATGGA
CAGGAAATAC TGGATGAGCT GCAACAACAA GAGCGTAATG TTATTTTGTT GGTCCCCCAT
GCCTGGTCCA TTGATATTCC GGCTATGCTG CTAGCGGAGC AGGGCAAGCC AGTTGCAGGT
ATGTTCCATC ATCAACGTAA TCCATTGGTG GACTATCTAT GGAACAGTGC GCGTTTACAT
TTCGGTGGTC GGATCCATGC CCGCGAAAGT GGCATCAAAC CTTTTATCAG TTCAGTACGC
CAAGGATTCT GGGGTTACTA CTTACCTGAT GAAGATTATG GTCCTGAGCA AAGTGAATTT
GTTGATTTCT TCGCGACCTA TAAGGCGACA TTACCGGCAA TAGGCCGTTT AATGAAAGTC
TGCCGTGCGG CCATTGTACC GATGTTCCCT GTTTATAATT ATAGAGAGCA TCGTCTTGAT
ATCTATATCC GTCCGCCAAT GGATGATTTG GCGGATGCTG ATGACGCCTA TATTGCCCGC
CGGATGAATG AGGAAGTGGA GTTGTTGGTT AAGCCGAATC CAGAGCAATA TACATGGATC
TTAAAGCTGT TAAAAACCCG GAAAGAGGGT GAAACCGAGC CCTATGTGCG CAAAGATCTT
TAG
 
Protein sequence
MHKEKNDATG FIPVFQKTFL HPRFWGVWLG AGAIAALAYI PPKFRDPLLA GIGRLAGKFA 
KSARRRARIN LLYCMPELPE SEREHIIDQM FATAAQPLMM MAELCFRDPK KVLTRVHWHG
QEILDELQQQ ERNVILLVPH AWSIDIPAML LAEQGKPVAG MFHHQRNPLV DYLWNSARLH
FGGRIHARES GIKPFISSVR QGFWGYYLPD EDYGPEQSEF VDFFATYKAT LPAIGRLMKV
CRAAIVPMFP VYNYREHRLD IYIRPPMDDL ADADDAYIAR RMNEEVELLV KPNPEQYTWI
LKLLKTRKEG ETEPYVRKDL