| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A2387 |
|---|
| Symbol | |
|---|
| ID | 5800857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 2502795 |
|---|
| End bp | 2503769 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641340267 |
|---|
| Product | mandelate racemase/muconate lactonizing family protein |
|---|
| Protein accession | YP_001606811 |
|---|
| Protein GI | 162421764 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.991592 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACAG TGCGTTTTTA CCCAGAGGCC TGGCCTCTTC ACTCCGCGTT TGTCATTTCC
CGAGGCAGCC GCACTGAAGC TAAAGTTATC GTTGTTGAAA TTGAGGAGAA CGACATTCAT
GCATTCGGTG AATGTACTCC ATACCCGCAT TATGGAGAAA GTGAATCTTC AGTGATGGCA
CAGCTTGCTT TGGTGGCTAA TGCTATTGAG AATGGCGTCT CGCGGGAAGC CTTACAGCCA
CTTTTACCGG CCGGAGCGGC GAGGAATGCC GTCGATTCTG CGTTATGGCA ACTGGAGTGT
TTGCAACATC AGCAAAGTTT ATGGCAACGA AGCCAGATAA CGGCAGTTGA AACCGTTGCC
ATGGCTCAGA CTGTCAGTAT TGGTACTCCG GAAGCCATGG CATGCAGTGC CAAAGCATTG
GTGCAGCTTG GGGCCCACTT GCTGAAAGTC AAACTTGATG AGCACCTGAT CGCCGAACGC
TTGGTTGCGA TACGCAGTGC GGTGCCAGAG GTAACGTTAA TCGTTGATGC TAATGAGGCT
TGGCAACCTG AAGGGCTGGC AGCGCGTTGC CAATTACTTG CTGACTTGGG GGTGGTGATG
CTAGAACAGC CGCTACCCGC AGGAGAAGAC AGTAGTTTAC AGAATTTCAT CCATCCATTA
CCCCTCTGTG CGGATGAAAG CTGTCACACG CGGGCTGATT TAGCGGGTTT GGTGGGTCGC
TATGACATGG TAAACATCAA ACTGGATAAA AGTGGTGGGC TGACCGAGGC ACTGCTACTG
GCTGAACAGG CTAAATCGAT GGGCTTTGCC ATTATGCTCG GCTGTATGCT GTGTACCTCT
CGTGCCATCC GTGCGGCACT GCCCTTAGCA CCGGGGGCGC GTTTTATTGA TTTAGATGGC
CCGACCTGGT TGGCAAATGA CGTAGAGGGG GGACTGCATT TTTCTACTGG TACGATAGAC
CTACGGGTAC GCTAG
|
|---|
| Protein sequence | MRTVRFYPEA WPLHSAFVIS RGSRTEAKVI VVEIEENDIH AFGECTPYPH YGESESSVMA
QLALVANAIE NGVSREALQP LLPAGAARNA VDSALWQLEC LQHQQSLWQR SQITAVETVA
MAQTVSIGTP EAMACSAKAL VQLGAHLLKV KLDEHLIAER LVAIRSAVPE VTLIVDANEA
WQPEGLAARC QLLADLGVVM LEQPLPAGED SSLQNFIHPL PLCADESCHT RADLAGLVGR
YDMVNIKLDK SGGLTEALLL AEQAKSMGFA IMLGCMLCTS RAIRAALPLA PGARFIDLDG
PTWLANDVEG GLHFSTGTID LRVR
|
|---|
| |