Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2357 |
Symbol | |
ID | 5800827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 2472247 |
End bp | 2473152 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641340241 |
Product | LysR family substrate-binding transcriptional regulator |
Protein accession | YP_001606785 |
Protein GI | 162420889 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.189784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.547268 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGATC TCAATGATCT CTATTACTAC GCAGAAGTTG TAGAACATGG CGGGTTCAGC GCCGCTGCAC GGGTGTTGGG CTTGCCTAAG TCCAAGCTAA GCCGCCGATT GGCTCTGCTT GAGGAACGTC TGGGGGTGCG GCTCATTCAA CGCTCAACCC GGCGCTTTGC TGTCACTGAT GTTGGCCGTA CCTATTACGA GCATTGTAAA GCGATGATCG AAGAGGCAAG AGCGGCGCAG GAGTCTATTG ATTTAACACG TGCGGAACCA CGCGGTGTGG TGCGAATCAC CTGCCCGGTG GCGCTGTTGC AGGCGACGGT CAGTACCATG CTGGCGGATT TTATGGCCAG TTGTCCTCTG GTGACGATTC ATCTGGAAGC GACTAACCGG CAGGTTGATC CCGTTGCTGA GGCCATTGAT ATTGCGATTC GCGTGCGGCC ACCGCCATTA CAAAATAGCG ATTTAGTGCT GCGGGTTCTG GGTAATCGCT GCCAGTGTTT GGTCGCTAGC CCTGAGTTGA TAGGGCGACA GGGTGAAGTA AATACTCCAG TTGATCTAAC CGGTTGGCCA AGCCTTGGGT TAGGGCAACC TCAGCAAACG TTTATTTGGA ACTTAGAAGG GCCGGAGAAG GCTCATGCAG CGGTGTATCA TCAGCCGCGG TTGGTGACAG CAGATATGAA TACCTTACGC AGTGCGGCAT TGGCCGGTGT AGGGGTAGTA CAATTGCCAC TGATGATGGT GACGGAACAA CTGGCCGAAG GCACATTAGT TCGCCTATTG CCTGATTGGT CAGTCCGCCA TGAGATTATT CATGCTGTCT ATCCTTCAAG GCGCGGGTTG CTACCTTCGG TACGCAGCGT ATTGGATTAT CTTGTTCAGC GCTTCAGCCA ATTGGATGAA CGGTGA
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Protein sequence | MHDLNDLYYY AEVVEHGGFS AAARVLGLPK SKLSRRLALL EERLGVRLIQ RSTRRFAVTD VGRTYYEHCK AMIEEARAAQ ESIDLTRAEP RGVVRITCPV ALLQATVSTM LADFMASCPL VTIHLEATNR QVDPVAEAID IAIRVRPPPL QNSDLVLRVL GNRCQCLVAS PELIGRQGEV NTPVDLTGWP SLGLGQPQQT FIWNLEGPEK AHAAVYHQPR LVTADMNTLR SAALAGVGVV QLPLMMVTEQ LAEGTLVRLL PDWSVRHEII HAVYPSRRGL LPSVRSVLDY LVQRFSQLDE R
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