Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2348 |
Symbol | pncA |
ID | 5800818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 2462293 |
End bp | 2462940 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641340233 |
Product | nicotinamidase/pyrazinamidase |
Protein accession | YP_001606777 |
Protein GI | 162418666 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000299891 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0437872 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAG CCTTGCTCTT AATCGATTTA CAAAACGACT TTTGTCCTGG TGGAGCGTTG GCTGTTAGTG AAGGTGATGA GGTCATTAGC GTGGCTAACC GCATGATTGA AGCCTGTCTC GCAAAAAACA TACCGGTGAT TGCCAGCCAA GATTGGCACC CAATTGAGCA CCGTAGCTTT GCGGTGAACG CCAAGGCGGA GCCGGGCACA GTTGGGGAAC TAGAAGGGTT AGTACAAGTA TGGTGGCCGG TACATTGTGT TCAGGAACAA CCAGGGGCAG CATTGCACCC ACAGCTGAAA CAAGGCGCTA TTACAGCTAT TTTTCGCAAA GGGCAAAACC CTGATATCGA CAGTTACAGC ACTTTCTTCG ACAATGGCCG GCGAGCTAAA ACAGCATTAG ATAGCTGGCT ACAACAGCAT AGCATTGACC ACCTGTATGT TATGGGGCTG GCCACAGATT ACTGTGTGAA ATATAGCGTA CTGGATGCAC TCGCTTTGGG TTATCAAACC ACGGTTATCA GTGATGGGTG TCGTGGGGTA AACTTGCAAC CACAAGACAG CCAACTGGCT TTCGATGCAA TGAGCGATGC AGGCGCCAAC TTACTGGCTC TTGAACAATG CCTGGCTGAA GTCGTTTCAG CCGACTGA
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Protein sequence | MKAALLLIDL QNDFCPGGAL AVSEGDEVIS VANRMIEACL AKNIPVIASQ DWHPIEHRSF AVNAKAEPGT VGELEGLVQV WWPVHCVQEQ PGAALHPQLK QGAITAIFRK GQNPDIDSYS TFFDNGRRAK TALDSWLQQH SIDHLYVMGL ATDYCVKYSV LDALALGYQT TVISDGCRGV NLQPQDSQLA FDAMSDAGAN LLALEQCLAE VVSAD
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