Gene YpAngola_A2307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2307 
Symbol 
ID5800777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2422803 
End bp2423564 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content52% 
IMG OID641340197 
Productshort chain dehydrogenase 
Protein accessionYP_001606742 
Protein GI162420707 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTATC AACCTAAACA TGACCTGCTC AATCAGCGCA TTATTCTCGT GACTGGCGCA 
GGTGATGGTA TTGGTCGTGA AGCGGCCCTG ACTTACGCTC GGTTTGGTGC TCGCCTGATA
TTAGTGGGCC GCACCGAAAG TAAATTGCTC GCGGTAAAAA AGCAGATAGC TGATGCGGGC
GGTTTGCCAG CGTTAGTGCT GTCACTGGAT CTATTGCATG CCACCGCCGC GGATTGTCAG
CAACTTGCTG ACACCGTAAG TGCACAGGTC CCTAGGCTGG ATGGCGTCTT ACATAACGCC
GGTTTATTGG GTGAAGTTGC CCCCATGTCC GAGCAAAGCA TCGCCGTCTG GCAAGACGTC
ATGCAAGTGA ATGTCAATGC AACATTTATG CTAACTCAAG CATTACTGCC ATTATTACTG
AAATCCCCTA GCGCCTCTCT GGTGTTCACC AGTTCCAGCG TTGGCCGTCA GGGACGTGCA
GGCTGGGGAG CTTATTCGGT CTCAAAATTT GCCACGGAAG GCATGATGCA AGTACTGGCC
GAGGAGTATA AACAGAGCAA CCTGCGGGTT AACTGCATCA ATCCTGGAGG AACCCGAACA
CAAATGCGGG CGACCGCATT CCCCGATGAA GATGCGAGCA AGTTGAAAAC GCCAGCAGAT
ATTATGCCGT TGTACCTCTA TTTGATGGGC GATGACAGCC GTAGAAAAAC GGGGATCAGC
TTCGATGCAC AGCCCGGCCG TAAACCTGGT CCAGCTGAAT AA
 
Protein sequence
MHYQPKHDLL NQRIILVTGA GDGIGREAAL TYARFGARLI LVGRTESKLL AVKKQIADAG 
GLPALVLSLD LLHATAADCQ QLADTVSAQV PRLDGVLHNA GLLGEVAPMS EQSIAVWQDV
MQVNVNATFM LTQALLPLLL KSPSASLVFT SSSVGRQGRA GWGAYSVSKF ATEGMMQVLA
EEYKQSNLRV NCINPGGTRT QMRATAFPDE DASKLKTPAD IMPLYLYLMG DDSRRKTGIS
FDAQPGRKPG PAE