Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2307 |
Symbol | |
ID | 5800777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 2422803 |
End bp | 2423564 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641340197 |
Product | short chain dehydrogenase |
Protein accession | YP_001606742 |
Protein GI | 162420707 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTATC AACCTAAACA TGACCTGCTC AATCAGCGCA TTATTCTCGT GACTGGCGCA GGTGATGGTA TTGGTCGTGA AGCGGCCCTG ACTTACGCTC GGTTTGGTGC TCGCCTGATA TTAGTGGGCC GCACCGAAAG TAAATTGCTC GCGGTAAAAA AGCAGATAGC TGATGCGGGC GGTTTGCCAG CGTTAGTGCT GTCACTGGAT CTATTGCATG CCACCGCCGC GGATTGTCAG CAACTTGCTG ACACCGTAAG TGCACAGGTC CCTAGGCTGG ATGGCGTCTT ACATAACGCC GGTTTATTGG GTGAAGTTGC CCCCATGTCC GAGCAAAGCA TCGCCGTCTG GCAAGACGTC ATGCAAGTGA ATGTCAATGC AACATTTATG CTAACTCAAG CATTACTGCC ATTATTACTG AAATCCCCTA GCGCCTCTCT GGTGTTCACC AGTTCCAGCG TTGGCCGTCA GGGACGTGCA GGCTGGGGAG CTTATTCGGT CTCAAAATTT GCCACGGAAG GCATGATGCA AGTACTGGCC GAGGAGTATA AACAGAGCAA CCTGCGGGTT AACTGCATCA ATCCTGGAGG AACCCGAACA CAAATGCGGG CGACCGCATT CCCCGATGAA GATGCGAGCA AGTTGAAAAC GCCAGCAGAT ATTATGCCGT TGTACCTCTA TTTGATGGGC GATGACAGCC GTAGAAAAAC GGGGATCAGC TTCGATGCAC AGCCCGGCCG TAAACCTGGT CCAGCTGAAT AA
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Protein sequence | MHYQPKHDLL NQRIILVTGA GDGIGREAAL TYARFGARLI LVGRTESKLL AVKKQIADAG GLPALVLSLD LLHATAADCQ QLADTVSAQV PRLDGVLHNA GLLGEVAPMS EQSIAVWQDV MQVNVNATFM LTQALLPLLL KSPSASLVFT SSSVGRQGRA GWGAYSVSKF ATEGMMQVLA EEYKQSNLRV NCINPGGTRT QMRATAFPDE DASKLKTPAD IMPLYLYLMG DDSRRKTGIS FDAQPGRKPG PAE
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