| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A2298 |
|---|
| Symbol | |
|---|
| ID | 5800768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 2411593 |
|---|
| End bp | 2412984 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641340189 |
|---|
| Product | putative arginine/ornithine antiporter ArcD |
|---|
| Protein accession | YP_001606734 |
|---|
| Protein GI | 162419219 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.552138 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAAAAGA AACTCGGTCT GACTGCGCTA ACGGCGCTGG TTCTTAGCTC AATGCTGGGA
GCGGGTGTCT TTAGCCTGCC GCAAAACATG GCTGAAGTCG CCAGCCCTGC TGCTCTGCTC
ATTGGCTGGA GTATTACTGG CATCGGGATC ATTTTCCTGG CCTTCGCCAT GTTGCTACTG
ACTCGCCTAC GCCCTGATCT CGATGGCGGG ATATTTACCT ATGCTAAAGA AGGTTTTGGC
GACCTCATCG GTTTTTTCTC TGCGTGGGGT TATTGGCTAT GTGCGGTGAT CGCTAACGTA
TCTTACTTGG TGATTGTTTT TGCAGCACTG AGCTTTTTTA CCGATAAATC CGGCAGCATC
ATTTTTGGTG AAGGTAACAC CTGGCAGGCA TTGTTGGGGG CATCATTCCT GTTATGGCTG
GTTCACGCTT TGGTACTACG AGGGGTACAG ACTGCGGCCA GTATCAACTT GGCGGCAACA
CTGGCAAAAC TGTTACCTAT TGGCGGCTTT ATTATTCTGG CCGGCATCGC ATTTAGCCTC
GATACTTTTA GTATCGATTT CACTGGCTTA GCACTACACA CGCCGGTTTG GCAGCAAGTA
AAAGATACCA TGCTGATTAC CTTATGGGTC TTTATCGGTG TCGAAGGTGC AGTGGTTGTC
TCTGCCCGTG CACGCAACAA GAAAGATGTG GGCCGTGCCA CGATGCTAGC CGTAATTTCA
GCCCTTAGCG TCTACCTGTT GATTACCTTA TTGTCACTCG GCGTGGTGCC TCGGGCGGAA
TTAGCGGGTA TGCGTAATCC GTCAATGGCA GGCATTATGG TCGAAATGAT TGGCCCATGG
GGAGAAATCA TTATCGCCAC CGGGCTGATT ATTTCTGTCT GTGGTGCTTA TCTTAGCTGG
ACAATTATGG CCGCTGAAGT ACCGATGGTG GCAGCTAAAC ATGGCGCTTT CCCTAAAATA
TTCCGTCACC AAAATAAAAA CAACGCGCCA GCTCAATCCT TATGGTTAAC CAACAGCGCG
GTACAAGTTG CGCTGGTTTT GATTTGGCTG ACAGGCAGCA ATTACAATAC CTTACTGACA
ATTGCCTCGG AAATGATTCT GGTGCCCTAT TTTCTCGTCG GTGCATTCTT ATTTAAAGTG
GCATTAAAGC GGCAAGATTG GCGTTTGATT GTTGCTGCCA GCGGGGCTTG TTTGTACGGT
TTATGGCTGA TTTATGCTGC TGGTTTAGTG TATTTACTGT TGTCTGTACT TTTGTATGCC
CCAGGATTAT TGGTGTTTAT TTATGCTCGT AAGGGGCATG AAGGGCTGAG ATTGCTGAAT
ACGGTTGAGC GGGCGGCGAT TTTCCTCGTG TTACTCGCCA CTATCCCAGC GACATGGTTG
ATGATGCACT AG
|
|---|
| Protein sequence | MEKKLGLTAL TALVLSSMLG AGVFSLPQNM AEVASPAALL IGWSITGIGI IFLAFAMLLL
TRLRPDLDGG IFTYAKEGFG DLIGFFSAWG YWLCAVIANV SYLVIVFAAL SFFTDKSGSI
IFGEGNTWQA LLGASFLLWL VHALVLRGVQ TAASINLAAT LAKLLPIGGF IILAGIAFSL
DTFSIDFTGL ALHTPVWQQV KDTMLITLWV FIGVEGAVVV SARARNKKDV GRATMLAVIS
ALSVYLLITL LSLGVVPRAE LAGMRNPSMA GIMVEMIGPW GEIIIATGLI ISVCGAYLSW
TIMAAEVPMV AAKHGAFPKI FRHQNKNNAP AQSLWLTNSA VQVALVLIWL TGSNYNTLLT
IASEMILVPY FLVGAFLFKV ALKRQDWRLI VAASGACLYG LWLIYAAGLV YLLLSVLLYA
PGLLVFIYAR KGHEGLRLLN TVERAAIFLV LLATIPATWL MMH
|
|---|
| |