Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2261 |
Symbol | araF |
ID | 5800731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 2369572 |
End bp | 2370555 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641340158 |
Product | L-arabinose ABC transporter periplasmic-binding protein |
Protein accession | YP_001606703 |
Protein GI | 162420663 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAAAT TAACTAAGGC GCTGGCAGTA GTCGGGTTAG CGGCGGTTAT GTCACATTCA GCTATTGCCG AAAGTATGAA ACTGGGGTTT CTGGTTAAGC AACCGGAAGA ACCTTGGTTC CAGACTGAAT GGAAGTTCGC TGATAAGGCG GGTAAGGATT TAGGCTTTGA AGTGATCAAA ATTGCCGTAC CCGATGGTGA GAAAACCCTG AACGCCATCG ACAGCCTGGC GGCCAGTGGT GCCCAAGGTT TTGTTATTTG TACACCAGAT CCAAAACTGG GGCCTGCCAT TGAAGCCAAA GCGCGCAGTT ATAACCTGAA AGTGATTGCT GTTGATGACC AATTTGTGAA TGCCAAAGGC AAACCGATGG AGAGTGTTCC GCTGGTGATG ATGGCAGCCA CTAAAATTGG TGAACGTCAG GGGCAGGAGT TGTGGAAAGA GATGAACAAA CGGGGTTGGC AACCCGCTGA AACAGCAGTA ATGGCGATCA CTTCTGATGA ATTAGATACC GCGCGTCGTC GTACCGGCGG TTCAATGGCG GCTCTGCAAG CTTCTGGCTT CCCGGAAAAG CAAATCTATA AAGTTCCGAC TAAATCTAAT GATATCCCCG GCGCATTTGA TGCCGCTAAC TCCATGTTAG TACAGCATCC AGAAGTGAAG AATTGGCTGA TTGTCGGCAT GAACGATAAC ACCGTATTAG GTGGCGTGCG TGCAACCGAA GGCCAAGGTT TTAAAGCACC GAATGTTATT GGCATTGGTA TCAACGGAGT TGATGCCGTG AGCGAGCTGT CCAAAGGCCA GGCGACGGGT TTCTATGGCT CTTTATTACC TAGCCCGGAT ATCCATGGCT ATAAAAGTAT TCAGATGCTG CATGACTGGG TCACTAAAGA TGTCGAACCT GCAAAATTTA CTGAAGTCAC CGATGTGGTG TTGATCACTC GGGATAACTT CAAAGCCGAG TTAGAGAAGA AAGGCTTATT GTAA
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Protein sequence | MHKLTKALAV VGLAAVMSHS AIAESMKLGF LVKQPEEPWF QTEWKFADKA GKDLGFEVIK IAVPDGEKTL NAIDSLAASG AQGFVICTPD PKLGPAIEAK ARSYNLKVIA VDDQFVNAKG KPMESVPLVM MAATKIGERQ GQELWKEMNK RGWQPAETAV MAITSDELDT ARRRTGGSMA ALQASGFPEK QIYKVPTKSN DIPGAFDAAN SMLVQHPEVK NWLIVGMNDN TVLGGVRATE GQGFKAPNVI GIGINGVDAV SELSKGQATG FYGSLLPSPD IHGYKSIQML HDWVTKDVEP AKFTEVTDVV LITRDNFKAE LEKKGLL
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