Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2248 |
Symbol | |
ID | 5800718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 2352048 |
End bp | 2352749 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641340148 |
Product | electron transport complex RsxE subunit |
Protein accession | YP_001606693 |
Protein GI | 162419190 |
COG category | [C] Energy production and conversion |
COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000887941 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.482499 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGAAG CGAAAAACCT GTTAGCACAA GGGTTGTGGA AAAATAACTC TGCGCTGGTG CAACTGTTGG GGCTCTGTCC ATTATTGGCA GTCTCTTCCA CGGCAACCAA CGCATTGGGG CTGGGGTTAG CGACCACGCT AGTCCTTGTG TGTACCAATA CCGCAGTTTC CGCATTGCGC CGTTGGGTAC CGTCTGAAAT CCGTATTCCT ATTTATGTCA TGATTATTGC GTCGGTCGTC AGTACCGTGC AAATGCTGAT CAACGCTTAT GCCTTTGGTT TATATCAATC ATTGGGGATA TTTATCCCAT TGATTGTGAC CAACTGTATC GTGATTGGCC GGGCAGAGGC CTATGCAGCG AAGAATCCGG TGGGGCTATC CGCATTGGAT GGTTTTGCCA TGGGGATGGG AGCAACCTGT GCCTTATTTG TTTTAGGGGC ACTGCGCGAA ATTTTGGGTA ACGGTACCTT ATTTGACGGC GCAGACATGT TGCTAGGCAG TTGGGCTACA GTACTGCGCA TTGACATCTT GCATTTAGAT ACCCCTTTCC TGCTGGCGAT GTTGCCACCA GGTGCGTTTA TCGGCCTGGG TTTACTGCTG GCCGGTAAAT ATGTCATTGA CGAGAAAATG AAAGCGCGCA AAGCCAATAC ACGGGTTAGC GTACCGCAAC TTCAGGATGG ATATGCCGAG AAAGCCTTAT GA
|
Protein sequence | MSEAKNLLAQ GLWKNNSALV QLLGLCPLLA VSSTATNALG LGLATTLVLV CTNTAVSALR RWVPSEIRIP IYVMIIASVV STVQMLINAY AFGLYQSLGI FIPLIVTNCI VIGRAEAYAA KNPVGLSALD GFAMGMGATC ALFVLGALRE ILGNGTLFDG ADMLLGSWAT VLRIDILHLD TPFLLAMLPP GAFIGLGLLL AGKYVIDEKM KARKANTRVS VPQLQDGYAE KAL
|
| |