Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2244 |
Symbol | rnb |
ID | 5800714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 2346314 |
End bp | 2348248 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641340144 |
Product | exoribonuclease II |
Protein accession | YP_001606689 |
Protein GI | 162421532 |
COG category | [K] Transcription |
COG ID | [COG4776] Exoribonuclease II |
TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases [TIGR02062] exoribonuclease II |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.469162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.153134 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCAAG ATAACCCGCT GCTGGCGCAG CTAAAACAGC AACTTCACAC TCAGACCCCA CGCGTTGAAG GCGTCGTTAA AGGTACTGAG AAAGGCTTTG GCTTTCTTGA GGTAGATGGG CAGAAAAGTT ACTTTATTCC GCCTCCGCAG ATGAAGAAGG TCATGCACGG CGATCGCATT ATTGCCACCC TGCATACGGA TAAGGATCGT GAAATTGCTG AACCTGAAAC ATTGGTTGAG CCATTTTTAT CCCGCTTTGT TGGCCGGGTG CAACGAAAAG ATGATCGTCT GTCTATCGTG CCCGACCACC CTTTATTACG TGATGCTATT CAATGCCGCC CAGTACGTGA ACTGACGCAT AGCTTCCAAA ACGGTGATTG GGCAGTGGCT GAGATGTGCC GCCACCCATT AAAAGGCGAC CGCGCCTTTC AGGCTGACCT AACCGCGTTT ATTACCAATG GTGAAGACCA CTTCGTTCCT TGGTGGGTAA CACTGGCTCG CCATAACCTT GAGCGTGAAG CCCCTGCTAT GGTCGAATCG GCCTTAAATG ACGCCGAGCT TGAGCGTGAA GACTTAACCG CACTTAATTT TGTCACTATC GACAGCGCCA GCACTGAAGA CATGGATGAT GCGCTGTTTG TCCAAGACAA TGGCGACGGT TCATGGTTAT TGACCATTGC CATTGCAGAC CCAACAGCTT ACGTCGTCGA AAACAGTGAA TTGGATTTAA CCGCCCGTAA GCGTGCTTTT ACCAATTATC TGCCGGGTTT TAACATCCCG ATGCTTCCGC GTGATTTGTC CGACAACCTC TGTTCACTGC GCCCAAATGA ACGTCGCCCA GTATTGGTTT GCCGTGTGAC GATCACAGAA GAAGGGACGC TAAGTAACGA TATTCGTTTC TCCGCTGCTT GGGTTGAATC AAAAGCCAAA CTGGTTTACG ACGATGTCTC TGACTGGTTG GAAGGAAATA ATCGCTGGCA GCCACAAGAT ACCGCTATTG CAGAGCAGAT TACGTTACTG AAACGTATCT GTGACGCCCG TAGCAACTGG CGTCAACAAC ATGCGCTGGT CTTTAAAGAC CGCCCAGACT ATCGCTTCCT GTTGGGTGAA AAAGGCGAAG TGCTGGATAT CATTGTTGAG CATCGTCGTA TCGCCAACCG CATTGTAGAA GAGTGTATGA TTGCGGCGAA CGTCTGTGCG GCATTGGCGT TACGGGAACA CCTCGGTTTT GGTATTTATA ACGTGCATAC CGGTTTTGAC CCGGCATTAG TCGAACAAGC GGCTAGCGTA TTGAAAGCCA ATGGTGTTGG TGCCGATCCT CAAGCCCTGC TGACGTTACC CGGTTTCTGT GAGTTACGCC GTCACCTTGA TGCCCTGCCA ACACAGTTCC TCGACAGCCG TATTCGCCGT TTCCAGACAT TTGCTGAAAT TAGTACTGTC CCCGGTCCGC ATTTTGGCTT GGGGCTTGAA GCCTATGCCA CCTGGACATC TCCAATCCGT AAATACGGCG ACATGGTCAA TCATCGCCTG CTGAAAGCGA TGATTACTGG TCAACAAGCA GAAAAACCAC AAGAAGAGAT CACGGTCCAA TTGGCTGAAC GTCGCCGCCT GAATCGCATG GCTGAACGTG ATGTCGGTGA TTGGTTGTAT GCCCGTTATC TGCAACCACA AGCAGGAACT GACACTCGTT TCACGGCAGA GATTATTGAT ATCACCCGCG GTGGCTTGCG TGTGCGTTTA CTGGATAACG GTGCCGTTGC CTTTATTCCT GCGCCGTTTA TTCACGCGGT GCGTGATGAA GTGGTCTGCA GCCAGGAAAC CGGTACTGTG CAGATCAAAG GCGAAACAGT TTATAGCCAA AGTGACAAAA TCGAGGTACG TATTGCGGAA GTTCGCATGG AAACCCGTAA TGTCATTGCT CGCCCAGTAG CTTAA
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Protein sequence | MFQDNPLLAQ LKQQLHTQTP RVEGVVKGTE KGFGFLEVDG QKSYFIPPPQ MKKVMHGDRI IATLHTDKDR EIAEPETLVE PFLSRFVGRV QRKDDRLSIV PDHPLLRDAI QCRPVRELTH SFQNGDWAVA EMCRHPLKGD RAFQADLTAF ITNGEDHFVP WWVTLARHNL EREAPAMVES ALNDAELERE DLTALNFVTI DSASTEDMDD ALFVQDNGDG SWLLTIAIAD PTAYVVENSE LDLTARKRAF TNYLPGFNIP MLPRDLSDNL CSLRPNERRP VLVCRVTITE EGTLSNDIRF SAAWVESKAK LVYDDVSDWL EGNNRWQPQD TAIAEQITLL KRICDARSNW RQQHALVFKD RPDYRFLLGE KGEVLDIIVE HRRIANRIVE ECMIAANVCA ALALREHLGF GIYNVHTGFD PALVEQAASV LKANGVGADP QALLTLPGFC ELRRHLDALP TQFLDSRIRR FQTFAEISTV PGPHFGLGLE AYATWTSPIR KYGDMVNHRL LKAMITGQQA EKPQEEITVQ LAERRRLNRM AERDVGDWLY ARYLQPQAGT DTRFTAEIID ITRGGLRVRL LDNGAVAFIP APFIHAVRDE VVCSQETGTV QIKGETVYSQ SDKIEVRIAE VRMETRNVIA RPVA
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