Gene YpAngola_A2244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2244 
Symbolrnb 
ID5800714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2346314 
End bp2348248 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content50% 
IMG OID641340144 
Productexoribonuclease II 
Protein accessionYP_001606689 
Protein GI162421532 
COG category[K] Transcription 
COG ID[COG4776] Exoribonuclease II 
TIGRFAM ID[TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02062] exoribonuclease II 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.469162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.153134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCAAG ATAACCCGCT GCTGGCGCAG CTAAAACAGC AACTTCACAC TCAGACCCCA 
CGCGTTGAAG GCGTCGTTAA AGGTACTGAG AAAGGCTTTG GCTTTCTTGA GGTAGATGGG
CAGAAAAGTT ACTTTATTCC GCCTCCGCAG ATGAAGAAGG TCATGCACGG CGATCGCATT
ATTGCCACCC TGCATACGGA TAAGGATCGT GAAATTGCTG AACCTGAAAC ATTGGTTGAG
CCATTTTTAT CCCGCTTTGT TGGCCGGGTG CAACGAAAAG ATGATCGTCT GTCTATCGTG
CCCGACCACC CTTTATTACG TGATGCTATT CAATGCCGCC CAGTACGTGA ACTGACGCAT
AGCTTCCAAA ACGGTGATTG GGCAGTGGCT GAGATGTGCC GCCACCCATT AAAAGGCGAC
CGCGCCTTTC AGGCTGACCT AACCGCGTTT ATTACCAATG GTGAAGACCA CTTCGTTCCT
TGGTGGGTAA CACTGGCTCG CCATAACCTT GAGCGTGAAG CCCCTGCTAT GGTCGAATCG
GCCTTAAATG ACGCCGAGCT TGAGCGTGAA GACTTAACCG CACTTAATTT TGTCACTATC
GACAGCGCCA GCACTGAAGA CATGGATGAT GCGCTGTTTG TCCAAGACAA TGGCGACGGT
TCATGGTTAT TGACCATTGC CATTGCAGAC CCAACAGCTT ACGTCGTCGA AAACAGTGAA
TTGGATTTAA CCGCCCGTAA GCGTGCTTTT ACCAATTATC TGCCGGGTTT TAACATCCCG
ATGCTTCCGC GTGATTTGTC CGACAACCTC TGTTCACTGC GCCCAAATGA ACGTCGCCCA
GTATTGGTTT GCCGTGTGAC GATCACAGAA GAAGGGACGC TAAGTAACGA TATTCGTTTC
TCCGCTGCTT GGGTTGAATC AAAAGCCAAA CTGGTTTACG ACGATGTCTC TGACTGGTTG
GAAGGAAATA ATCGCTGGCA GCCACAAGAT ACCGCTATTG CAGAGCAGAT TACGTTACTG
AAACGTATCT GTGACGCCCG TAGCAACTGG CGTCAACAAC ATGCGCTGGT CTTTAAAGAC
CGCCCAGACT ATCGCTTCCT GTTGGGTGAA AAAGGCGAAG TGCTGGATAT CATTGTTGAG
CATCGTCGTA TCGCCAACCG CATTGTAGAA GAGTGTATGA TTGCGGCGAA CGTCTGTGCG
GCATTGGCGT TACGGGAACA CCTCGGTTTT GGTATTTATA ACGTGCATAC CGGTTTTGAC
CCGGCATTAG TCGAACAAGC GGCTAGCGTA TTGAAAGCCA ATGGTGTTGG TGCCGATCCT
CAAGCCCTGC TGACGTTACC CGGTTTCTGT GAGTTACGCC GTCACCTTGA TGCCCTGCCA
ACACAGTTCC TCGACAGCCG TATTCGCCGT TTCCAGACAT TTGCTGAAAT TAGTACTGTC
CCCGGTCCGC ATTTTGGCTT GGGGCTTGAA GCCTATGCCA CCTGGACATC TCCAATCCGT
AAATACGGCG ACATGGTCAA TCATCGCCTG CTGAAAGCGA TGATTACTGG TCAACAAGCA
GAAAAACCAC AAGAAGAGAT CACGGTCCAA TTGGCTGAAC GTCGCCGCCT GAATCGCATG
GCTGAACGTG ATGTCGGTGA TTGGTTGTAT GCCCGTTATC TGCAACCACA AGCAGGAACT
GACACTCGTT TCACGGCAGA GATTATTGAT ATCACCCGCG GTGGCTTGCG TGTGCGTTTA
CTGGATAACG GTGCCGTTGC CTTTATTCCT GCGCCGTTTA TTCACGCGGT GCGTGATGAA
GTGGTCTGCA GCCAGGAAAC CGGTACTGTG CAGATCAAAG GCGAAACAGT TTATAGCCAA
AGTGACAAAA TCGAGGTACG TATTGCGGAA GTTCGCATGG AAACCCGTAA TGTCATTGCT
CGCCCAGTAG CTTAA
 
Protein sequence
MFQDNPLLAQ LKQQLHTQTP RVEGVVKGTE KGFGFLEVDG QKSYFIPPPQ MKKVMHGDRI 
IATLHTDKDR EIAEPETLVE PFLSRFVGRV QRKDDRLSIV PDHPLLRDAI QCRPVRELTH
SFQNGDWAVA EMCRHPLKGD RAFQADLTAF ITNGEDHFVP WWVTLARHNL EREAPAMVES
ALNDAELERE DLTALNFVTI DSASTEDMDD ALFVQDNGDG SWLLTIAIAD PTAYVVENSE
LDLTARKRAF TNYLPGFNIP MLPRDLSDNL CSLRPNERRP VLVCRVTITE EGTLSNDIRF
SAAWVESKAK LVYDDVSDWL EGNNRWQPQD TAIAEQITLL KRICDARSNW RQQHALVFKD
RPDYRFLLGE KGEVLDIIVE HRRIANRIVE ECMIAANVCA ALALREHLGF GIYNVHTGFD
PALVEQAASV LKANGVGADP QALLTLPGFC ELRRHLDALP TQFLDSRIRR FQTFAEISTV
PGPHFGLGLE AYATWTSPIR KYGDMVNHRL LKAMITGQQA EKPQEEITVQ LAERRRLNRM
AERDVGDWLY ARYLQPQAGT DTRFTAEIID ITRGGLRVRL LDNGAVAFIP APFIHAVRDE
VVCSQETGTV QIKGETVYSQ SDKIEVRIAE VRMETRNVIA RPVA