| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A2227 |
|---|
| Symbol | |
|---|
| ID | 5800697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 2328817 |
|---|
| End bp | 2329326 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641340127 |
|---|
| Product | IS1541 transposase |
|---|
| Protein accession | YP_001606672 |
|---|
| Protein GI | 162420668 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1943] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000000835855 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.00464434 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGCGGTCTG GCAACAGCAA ATGTTCAACA AGAAATCAAA AGGGGGTCCC AATGAGGGAT
GAAAAGAGCT TAGCGCACAC CCGATGGAAC TGTAAATATC ATATAGTTTT TGCGCCGAAG
TACCGAAGGC AGGTGTTCTA CAGGGAAAAA CGCAGAGCGA TTGGCAGTAT TTTAAGAAAA
CTGTGCGAAT GGAAAAACGT GAATATCCTG GAAGCAGAAT ACTGTGTGGA TCACATCCAT
ATGCTTCTGG AGATCCCGCC CAAGATGAGT GTCTCGGGAT TTATGGGGTA CCTGAAGGGA
AAGAGCAGTC TGATGCTTTA TGAGCAGTTT GGCGATTTGA AGTTCAAATA CCGTAACAGG
GAGTTTTGGT GTCGAGGGTA TTACGTTGAT ACGGTAGGGA AAAACACGGC CAGGATACAA
GAATACATAA AGCACCAATT GGAAGAGGAT AAAATGGGTG AGCAACTCTC GATCCCGTAT
CCCGGTAGCC CGTTTACGGG CCGTAAGTAA
|
|---|
| Protein sequence | MRSGNSKCST RNQKGVPMRD EKSLAHTRWN CKYHIVFAPK YRRQVFYREK RRAIGSILRK
LCEWKNVNIL EAEYCVDHIH MLLEIPPKMS VSGFMGYLKG KSSLMLYEQF GDLKFKYRNR
EFWCRGYYVD TVGKNTARIQ EYIKHQLEED KMGEQLSIPY PGSPFTGRK
|
|---|
| |