Gene YpAngola_A2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2178 
Symbol 
ID5800648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2277247 
End bp2277810 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content43% 
IMG OID641340085 
Producthypothetical protein 
Protein accessionYP_001606630 
Protein GI162420293 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0897707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTC AATTATCCTT TCGCAACACT CAATTCGATA TTGCCAATCA CTCTGGACAA 
ATCTGGTTAC GTGGGACTGA AATTGCCAAA GCGCTTGGCA TGGAAAAATC AGATGCAGTA
AGCCAGATAT ACAATCGAAA TTCCGACGAA TTTACAGAAG CCATGACCTT GACCCTCAAA
TTGAGTGTAA AGGGGTTTGG TAACGGAAAG TCAGCAAAAG ACGTTAGAGT TTTCTCCCTG
CGCGGCGCTC ATTTGATCGC CATGTTTGCC CGTACTGAAA TAGCCAAAGA ATTCCGCAAA
TGGGTGCTCG ACATTTTGGA CAAAGAAGTC GGTAACACCC CACCCGTAAT AACACCCGTC
ACCAAAGTTC CAGCAGAATT AAAATCTCGT TATCGTGTGC GCGTTATTAT TTATGATGAA
ATGTTTGGTA ATTGCCTTGA GCTTATAGGG AAAGCGGACA CATTTAGAAC AATAGCAAGT
GGAATAGCTA CGGACTTAGG ATTTAAGCCG ACTGGCTTTG TCGCTGTGCA AATGGATAGC
AGCAAGTTCA AGCGAATTTA TTGA
 
Protein sequence
MNTQLSFRNT QFDIANHSGQ IWLRGTEIAK ALGMEKSDAV SQIYNRNSDE FTEAMTLTLK 
LSVKGFGNGK SAKDVRVFSL RGAHLIAMFA RTEIAKEFRK WVLDILDKEV GNTPPVITPV
TKVPAELKSR YRVRVIIYDE MFGNCLELIG KADTFRTIAS GIATDLGFKP TGFVAVQMDS
SKFKRIY