Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2178 |
Symbol | |
ID | 5800648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 2277247 |
End bp | 2277810 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641340085 |
Product | hypothetical protein |
Protein accession | YP_001606630 |
Protein GI | 162420293 |
COG category | [K] Transcription |
COG ID | [COG3617] Prophage antirepressor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0897707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACTC AATTATCCTT TCGCAACACT CAATTCGATA TTGCCAATCA CTCTGGACAA ATCTGGTTAC GTGGGACTGA AATTGCCAAA GCGCTTGGCA TGGAAAAATC AGATGCAGTA AGCCAGATAT ACAATCGAAA TTCCGACGAA TTTACAGAAG CCATGACCTT GACCCTCAAA TTGAGTGTAA AGGGGTTTGG TAACGGAAAG TCAGCAAAAG ACGTTAGAGT TTTCTCCCTG CGCGGCGCTC ATTTGATCGC CATGTTTGCC CGTACTGAAA TAGCCAAAGA ATTCCGCAAA TGGGTGCTCG ACATTTTGGA CAAAGAAGTC GGTAACACCC CACCCGTAAT AACACCCGTC ACCAAAGTTC CAGCAGAATT AAAATCTCGT TATCGTGTGC GCGTTATTAT TTATGATGAA ATGTTTGGTA ATTGCCTTGA GCTTATAGGG AAAGCGGACA CATTTAGAAC AATAGCAAGT GGAATAGCTA CGGACTTAGG ATTTAAGCCG ACTGGCTTTG TCGCTGTGCA AATGGATAGC AGCAAGTTCA AGCGAATTTA TTGA
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Protein sequence | MNTQLSFRNT QFDIANHSGQ IWLRGTEIAK ALGMEKSDAV SQIYNRNSDE FTEAMTLTLK LSVKGFGNGK SAKDVRVFSL RGAHLIAMFA RTEIAKEFRK WVLDILDKEV GNTPPVITPV TKVPAELKSR YRVRVIIYDE MFGNCLELIG KADTFRTIAS GIATDLGFKP TGFVAVQMDS SKFKRIY
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