Gene YpAngola_A2136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2136 
Symbol 
ID5800606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2234054 
End bp2234767 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content47% 
IMG OID641340044 
ProductABC transporter ATP-binding protein 
Protein accessionYP_001606589 
Protein GI162419150 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.175565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGT CAATCATAGG GATGAAACCT GAACATCTGG CTGATGCCGT TATTGAAACC 
CGACATTTGT ATAAGCGCTT TGGTCAAGTT ACGGCACTGG AAGACATCAA TATTCGTATT
AACCGTGGTG AGTTTGTGGC GATTATGGGG GCATCAGGCT CGGGAAAAAC GACATTAATG
AATATCCTGA CTTGCCTGGA TACGGTAAGT GAAGGCCAAG TATTACTCGA CGGAATTGAT
GCCGCAGGTT TGGATGAAGA GGGCCGCCGA CAATTTAGAG CCGATAAGAT AGGGTTGGTC
TTCCAGCAAT TTCACCTTAT TCCTTACCTT ACTGCCTTAG AAAATATCAT GTTGGCCCAG
CATTATCACA GTGTGGTCGA TGAAGAGGCC GCCAGACAAG TATTGGAACA AGTGGGGATG
ACACCACGTA TGGGCCATTT ACCTAGCCAA CTATCCGGTG GCGAACAGCA ACGGGTATGT
ATTGCACGGG CGTTGGTGAA TCAACCGCCG ATCATTTTTG CCGATGAACC GACCGGCAAC
CTGGATGAAG AGAATGAACA GCGAGTCTTG GAATTGCTAA ACCATATCCA TCGTCAAGGC
CGTACTATTG TCATGGTGAC CCATAATCCA GATTTAAGCT GTGTTGCTGA CCGGGTTATC
CGGCTGCAAC ATGGTAAATA TCTTGATGAA AAGAGCCGCC ATCATGTGGC GTAA
 
Protein sequence
MTSSIIGMKP EHLADAVIET RHLYKRFGQV TALEDINIRI NRGEFVAIMG ASGSGKTTLM 
NILTCLDTVS EGQVLLDGID AAGLDEEGRR QFRADKIGLV FQQFHLIPYL TALENIMLAQ
HYHSVVDEEA ARQVLEQVGM TPRMGHLPSQ LSGGEQQRVC IARALVNQPP IIFADEPTGN
LDEENEQRVL ELLNHIHRQG RTIVMVTHNP DLSCVADRVI RLQHGKYLDE KSRHHVA