| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A2132 |
|---|
| Symbol | |
|---|
| ID | 5800602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 2228715 |
|---|
| End bp | 2230634 |
|---|
| Gene Length | 1920 bp |
|---|
| Protein Length | 639 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641340040 |
|---|
| Product | FTR1 family iron permease |
|---|
| Protein accession | YP_001606585 |
|---|
| Protein GI | 162421259 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0672] High-affinity Fe2+/Pb2+ permease |
|---|
| TIGRFAM ID | [TIGR00145] FTR1 family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0517239 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTT GGCAAAAATT CTTGCTGCTC TTCTGCTGTT GGGTGTTATC TGGTCCGCTA
GTGTGGGCTT CAACAGACTA CTCACTGTGG GTTAATGATA TTCAATCCCG GTTAGATAAA
ACGGCTCAGT TGTATCAACA ACAAAAAACT GATGAAGCGA GAGCAATGGT ACAGATGGCG
TATTTTGAGG TGTTTGAAAA CCTTGAGGGG CCGATTCGTA TCAACATCTC CGCGCAAAAA
AGCTTCCAGA TGGAGGCGGC CTTTGGCGAA ATAAGGCGGA TGATTGGTGA AGGCAAATCA
CAGGCTGATG TCGATAATAA AATCAATTGG TTGAAAGGCG AACTAACGGG TGTCTTGCCC
GTGTTAGTTG ATGGACACAA ACTCACTGCT GAGCAGCAAC ACGCTGCTTA TGAAAACAGC
GATATTGCCG TATATTGGCA ACAGAGCTTT AGAATTATTG ATGATTTATT GGCGCAAGCT
ATCAGTGAAT ATCAGGACGG CAAATATGCC GAAGCCAGTA AAAGTGTGCA GCAGGCGCAT
TATCAGGGGT TTAAAAACTC TGAAATGGAG ATGTCGGTGC GGGGAAATCG CTCGGCACAG
CAAGCAGCGG AGATAAATCA GCAATTTACC GCCTTGATCG ATTTGGCGCG CCAGCCCGAT
AAAATGACCG AAGTGGCCTA TCGTGTCACC GGGTTGCTAC ACACCATTGA AGACATCTTA
CCGGGCTTAC CAACCACTCG CGAACAACAA CAAATTACTG TTGACCAACC CATCTCTTCC
GACGCCATCC CCGATACACA AGCTAATGCT GATTGGGCGC AGGTATCCAG CAAAATCAAT
CAAGCGGTTA CTGAGGCTAT CGGGCAATAC CAGCAAGGGA AAATAACACC GGCAATGATG
GCGGTGCAGG ATGCCTACTT TGACTTGTTC GAAGCCAGTG GCATGGAAAA CAAGGTGGGA
TCGCGTGATG CAGCATTTAA ATCAACGTTA GAAGGCCACT TCACCCGCTT AGTTGGTTTA
ATGAAAGCTG AGAAACCGGT TGAGCAACTA CAAGCCGAAG CGGTTGCCTT GCAAAAAGAT
CTGGTCAATG CAGCCGAGAT GCTGGGTGAT GGCGGAGAGA CCGACTGGAG TCTGTTCGTT
TACAGTTTGT TGATCATTGT ACGTGAAGGG CTGGAGGCAT TACTGATTGT TGCGGCCATT
GTCGCTTATT TGGTGAAGAA CAACCATCAG GACAAATTGC CGTTGATTCG TCAATCGGTG
GTGGTGGCAC TCATCGCCAG CGTATTAACG GCATTCATCT TCCAATGGTT GTTTGCCAAC
TCTGGCCAAA GCCGCGAGTT GTTGGAGGGG TTCACCATGA TGATTGCGGT GGTGATGCTG
TTCTCCATGA GTTATTGGTT GTTATCGAAG GCTGAAGCCC GTAATTGGAA GGCGTACCTC
GAAGGAAAAT TCGCTAAATC ACTTAGCAGT GGATCAATAA TAGGTTTATG GCTCACTAGC
TTCCTGGCGG TATACCGAGA AGGGGCGGAG ACCGTTCTGT TCTACCTCGC ATTGATAGGC
GATGCCAATA CCACCAGCGG CCACTTATCG GTTCTGGCCG GTTTTGGCGT TGGTTGTGTG
ATCTTGCTGG TGGCTTATTT GGTGATGCGC TTTACCGTGG TCAAACTACC ACTTAAACCA
TTCTTTATAT TTACCGGTGG CTTTATGTAC CTGATGGCAT TTGTTTTTGC CGGTAAAAGT
GTTCTGGAAC TGATCGAAGG TAAATTGTTT GAACCCACTT TACTGCCGGG TGTACCTGAA
ATTAGTTGGT TGGGCATCTA TCCTTATGTG GAAACGCTGA TCCCACAAGG CGTGTTACTG
ATTGCAGCAT TAGTTGCCCT TTGGGTTATG CAATGGCGTA GTCGGACGGT TCACCGCTAA
|
|---|
| Protein sequence | MRIWQKFLLL FCCWVLSGPL VWASTDYSLW VNDIQSRLDK TAQLYQQQKT DEARAMVQMA
YFEVFENLEG PIRINISAQK SFQMEAAFGE IRRMIGEGKS QADVDNKINW LKGELTGVLP
VLVDGHKLTA EQQHAAYENS DIAVYWQQSF RIIDDLLAQA ISEYQDGKYA EASKSVQQAH
YQGFKNSEME MSVRGNRSAQ QAAEINQQFT ALIDLARQPD KMTEVAYRVT GLLHTIEDIL
PGLPTTREQQ QITVDQPISS DAIPDTQANA DWAQVSSKIN QAVTEAIGQY QQGKITPAMM
AVQDAYFDLF EASGMENKVG SRDAAFKSTL EGHFTRLVGL MKAEKPVEQL QAEAVALQKD
LVNAAEMLGD GGETDWSLFV YSLLIIVREG LEALLIVAAI VAYLVKNNHQ DKLPLIRQSV
VVALIASVLT AFIFQWLFAN SGQSRELLEG FTMMIAVVML FSMSYWLLSK AEARNWKAYL
EGKFAKSLSS GSIIGLWLTS FLAVYREGAE TVLFYLALIG DANTTSGHLS VLAGFGVGCV
ILLVAYLVMR FTVVKLPLKP FFIFTGGFMY LMAFVFAGKS VLELIEGKLF EPTLLPGVPE
ISWLGIYPYV ETLIPQGVLL IAALVALWVM QWRSRTVHR
|
|---|
| |