Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2131 |
Symbol | |
ID | 5800601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 2226545 |
End bp | 2228134 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641340039 |
Product | major facilitator transporter |
Protein accession | YP_001606584 |
Protein GI | 162420978 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.025245 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCGATGA TTACCATCGC GCTGGCCCAG ATCCTGATGT CATTCAACGT GGCCTCCCTA CCTGTTGCGT TGGGCGGGAT GGTAAAGAGC TTTAATGTGC CACCAACCAC TATTGCCACG GCGATAGTCA TGTACTCATT GTCGGTTGCA GGCTTTGTGA TGTTGGGTGC CAAACTCAAC CAACGCTTTG GGCCATTGAT AGTATTCCGC TGTACAGTTC TGTTATTCGG CCTGGCTCAG ACCATGATGA CATTCAGCCC GAATGTCACT GTAATGATCG GTGCGCAGGC ACTGAGTGGT CTGGCAGGTG CGGCATTGGT ACCGGCACTG GTGGCGTTAA TTGCTGAAAA CTACCGTGGG CCTCAACAGG CCACCGCACT GGGGGCATTA GGTTCTGCTC GCGCAGGGGC GGGTGTTGCT GCGTTCCTGA TCGGCGGTAT TTTGGGAACC CATATCGGCT GGCGTCCAGC GTTCGGTATT TTGATTGTGT TGTCTGTTAT CGTTTTTGTA CTGAGTTTCC GTCTGAAAGC AGATAAAGGC CGCCCAGAAG TGGGTATTGA TGTTATCGGT GTCGTTTTAG CTGCATCTGC GATTATTTTG TTGTCGTTCG GCTTTAATAA CCTGAACCGT TGGGGCTTTG GTCTGGTTCG TGACGGCGCG CCGTTTGACC TGCTCGGTTT CTCACCAGCG CCGTTTATGA TCGTGTTGGG TATCGTCTTG GGTCAGGCAT TTGTGGTCTG GACCCGCCGC CGTCAGGAGC AAGGTAAAAC GCCATTACTG GCGCTAGACG TGATTACATC ACCCAGTGAG CGGGCGGCGG TATTTGCCAT GTTTGCGGTG GTTGCGCTGG AAGCCATGCT GAACTTTTCT GTTCCGCTGT ATATACAAAT CGTGCAGGGC AGTTCGCCGA TGGCAACAGC TATCGCTATG ATGCCGTTTA ACCTATCGGT ATTCTTCTCT GCGATGCTGA TTGTACGTTT CTACAAGAAA CTGACTCCGC GTAAAATTGG TCGTTACGGT TTCATCACTT GTACTTTGGC GCTGTTGTGG CTGGCATTCG TGGTACGTAA TAACTGGAGT GAGTGGTCGG TCTTGATTGG TTTGGTGGTG TTCGGTATCG GACAAGGCTC ACTCGTCACC TTGCTGTTCA ACGTACTGGT CAGTGCATCA CCAAAAGAAT TGGCAGGCGA TGTGGGTTCT TTACGTGGTA CGACCAACAA CCTGGCAAGC GCCATCGGTA CAGCGGTTGC AGGTGCCTTG CTGGTGGGCT TGTTAAGTGC CAACGTGATG CGTGGTGTCG CTGAAACGCC GATTCTGACG GATGAGATCC AAGCTCAGGT CAATATGGAT AGCATCAACT TCGTCAGTAA TGATCGCCTG AACAGTGTAT TGGCTCAAAC CTCCGCGACC CCAGAACAGG TTGCCGAAGC GGTGCGGGTG AATGAAGAAG CACGGTTACG TGCGCTGAAA TTCGGTTTAC TGGTTATGGC GCTGCTATCG CTGTTGGCTA TCTTCCCTGC TGGCCGCTTA CCTGACTATC TGCCGGGTGA ACTGCCTGCT GATAATCTGG ATAAAAAAGC CAGCAAGTAA
|
Protein sequence | MPMITIALAQ ILMSFNVASL PVALGGMVKS FNVPPTTIAT AIVMYSLSVA GFVMLGAKLN QRFGPLIVFR CTVLLFGLAQ TMMTFSPNVT VMIGAQALSG LAGAALVPAL VALIAENYRG PQQATALGAL GSARAGAGVA AFLIGGILGT HIGWRPAFGI LIVLSVIVFV LSFRLKADKG RPEVGIDVIG VVLAASAIIL LSFGFNNLNR WGFGLVRDGA PFDLLGFSPA PFMIVLGIVL GQAFVVWTRR RQEQGKTPLL ALDVITSPSE RAAVFAMFAV VALEAMLNFS VPLYIQIVQG SSPMATAIAM MPFNLSVFFS AMLIVRFYKK LTPRKIGRYG FITCTLALLW LAFVVRNNWS EWSVLIGLVV FGIGQGSLVT LLFNVLVSAS PKELAGDVGS LRGTTNNLAS AIGTAVAGAL LVGLLSANVM RGVAETPILT DEIQAQVNMD SINFVSNDRL NSVLAQTSAT PEQVAEAVRV NEEARLRALK FGLLVMALLS LLAIFPAGRL PDYLPGELPA DNLDKKASK
|
| |