Gene YpAngola_A2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2118 
Symbol 
ID5800588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2212126 
End bp2212968 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content53% 
IMG OID641340027 
ProductHpcH/HpaI aldolase/citrate lyase family protein 
Protein accessionYP_001606572 
Protein GI162418617 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.397559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAATC TTGATACTTA CCAAACCCGC AGTTGGCTCT TTACGCCAGC CACTCGCTCG 
GATCGCTTTG CTAAAGCGGC TGAAAACGGT GCAGATGTCG CCATTATTGA TCTTGAAGAT
TCGGTCTCTC AAGCGGATAA GGAGCAGGCC CGACAAAAAG CCATCTCTTA TCTCTCTTCA
CGTCCGGCTA CATCACTACC GCTGGCACTA CGGATCAACG GACTGGATAC TCGTGCCGGT
ATTGAGGATA TTCACGCCTT ACTCGAATGT GGCAGCCTTC CCGATTACCT AGTCCTTCCT
AAAACGGAGT CAGCGGCTCA TCTGCAGATT CTGGATCGCC TAATGATGTT CGCAGGCTCT
GATACGCGCC TTATCGGCAT CATTGAATCT GTACGTGGCC TCAACGCTGT TGAGTCTATT
GCTGCTGCCA CCCCAAAATT GGCCGGATTG ATATTTGGTG CTGCGGACAT GGCCGCCGAT
ATTGGCGCAG CATCCACCTG GGAACCGCTA GCGCTGGCGC GTGCCCGGTT AGTCTCCGCC
TGTGCGATGA ATGGCATTCC CGCTATTGAT GCCCCTTTTT TTGATGTCCA CGATGTTTCA
GGCCTACAGT CTGAGACCCT TCGCGCATCT GATTTCGGCT TTTCTGCAAA AGCGGCCATT
CATCCCGCAC AAATCAGCAC AATCAATACC TTATTTACCC CCACTGCAGC AGAGATACGC
CATGCACGCG CAGTGCTCGC CGAGAATACC AAAGGGGTCG GGACCGTCAA CGGAATGATG
ATCGATGAGG CTGTTGCACG TCAGGCCCGC CGGGTACTTA CCCGAGCGGG TATCTCTGCC
TGA
 
Protein sequence
MSNLDTYQTR SWLFTPATRS DRFAKAAENG ADVAIIDLED SVSQADKEQA RQKAISYLSS 
RPATSLPLAL RINGLDTRAG IEDIHALLEC GSLPDYLVLP KTESAAHLQI LDRLMMFAGS
DTRLIGIIES VRGLNAVESI AAATPKLAGL IFGAADMAAD IGAASTWEPL ALARARLVSA
CAMNGIPAID APFFDVHDVS GLQSETLRAS DFGFSAKAAI HPAQISTINT LFTPTAAEIR
HARAVLAENT KGVGTVNGMM IDEAVARQAR RVLTRAGISA