Gene YpAngola_A2110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2110 
Symbol 
ID5800580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2203855 
End bp2204385 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content49% 
IMG OID641340020 
Productfimbrial protein 
Protein accessionYP_001606565 
Protein GI162419196 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.380081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CTTTAGTGAC GTTGATGCTA TTTATCCTGC CGGGTATAGC TTTTGCGGAA 
ACCTCGAACA ATACCATAAA GTTCCAGGGA GAAGTCGCAG AACAGACCTG TATGGTGGAT
ATCAATGGTA CCGCCAACAC CCCGGTGGTT CTGCTGCCGA CTGTCTCGAC CAGTAACCTT
AATCAAGTCA ACTCGGTGGC GGGAAAGACC AACTTTACGA TCAATCTAAC AGGCTGCAAT
ATTGCGATTC AAGATACCCA AATCAGCTCT GTTTTTCAGG GGATGAATGT CACGTCTGGC
GGAAACCTGG GCAATATTGG CACAGCAAGA AATGTTGCCA TTCAATTAAT TGATCCCCGT
GGCACCCCGA TTCGTATGTC TGGTGGCAGT GTGGAAGTTC CGGGAATTAC CTTGGCGACT
GGCGCAACCT CAGCATCACA GGATCTGTCG GCACAATATA TAACGGAAGA AGGCCAGGCA
ACCGCAGGCA GTGTTATTGC CTCTGCACAG TATGCGATCA CCTACCCCTA A
 
Protein sequence
MKKTLVTLML FILPGIAFAE TSNNTIKFQG EVAEQTCMVD INGTANTPVV LLPTVSTSNL 
NQVNSVAGKT NFTINLTGCN IAIQDTQISS VFQGMNVTSG GNLGNIGTAR NVAIQLIDPR
GTPIRMSGGS VEVPGITLAT GATSASQDLS AQYITEEGQA TAGSVIASAQ YAITYP