| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1975 |
|---|
| Symbol | |
|---|
| ID | 5800445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 2057888 |
|---|
| End bp | 2058535 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641339898 |
|---|
| Product | metallo-beta-lactamase superfamily protein |
|---|
| Protein accession | YP_001606448 |
|---|
| Protein GI | 162420777 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0642346 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATC AAATTATTCC AGTCACGGCG TTTAGCCAGA ACTGTACGTT AATCTGGTGT
GAAGCGACGG GGCAGGCTGC CTTAGTGGAT CCCGGTGGTG AGGCCACTAA AATAATTGCT
GAGGTTGAGC GTCAGGGGGT TACCATCAGC CAGGTTCTGT TGACTCATGG TCATTTAGAT
CATGTTGGCG CGGCCGCTGA AGTTGCTGCA CATTTTCAGG TACCGATTTA TGGCCCTGAA
AAAGAAGACA CTTTCTGGTT GGAAGGCTTA CCCGCACAGA GCCGAATGTT TGGGCTAAGT
GAATGTGAGG CTTTTACCCC GACCCGCTGG TTGGAAGAAG GCGATAAAAT AACGGTTGGC
GAAATAGAGT TATCTGTTTT GCATTGTCCG GGGCACACGC CGGGGCATAT TGTATTTATT
GACCCGCAAG GCCGCCTGGC TCTGGTGGGG GATGTTATCT TCAAGGGGGG CGTGGGGCGC
AGTGATTTTC CGCGTGGCGA CCATCAACAG TTAATTAACT CCATCCGCAC TAAATTACTG
CCGTTGGGCG ATGATATAAC GTTTATTCCC GGCCATGGGC CTATGTCTAC ATTGGGGCAT
GAGCGGCAGA CAAATCCGTT TATTCGAGAA GAGCCGGCTA TTTGGTGA
|
|---|
| Protein sequence | MKYQIIPVTA FSQNCTLIWC EATGQAALVD PGGEATKIIA EVERQGVTIS QVLLTHGHLD
HVGAAAEVAA HFQVPIYGPE KEDTFWLEGL PAQSRMFGLS ECEAFTPTRW LEEGDKITVG
EIELSVLHCP GHTPGHIVFI DPQGRLALVG DVIFKGGVGR SDFPRGDHQQ LINSIRTKLL
PLGDDITFIP GHGPMSTLGH ERQTNPFIRE EPAIW
|
|---|
| |