| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1965 |
|---|
| Symbol | kdsB |
|---|
| ID | 5800435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 2044193 |
|---|
| End bp | 2044945 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641339888 |
|---|
| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
|---|
| Protein accession | YP_001606438 |
|---|
| Protein GI | 162420559 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
|---|
| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.583633 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTCA TTGCTATAAT TCCCGCCCGC TATGCTTCAA CCCGTTTACC CGGCAAACCA
CTGGCTGATA TTGCGGGCAA ACCGATGGTC GTCCATGTTA TGGAGCGGGC CTTGGCGTCA
GGTGCTGACC GGGTGATTGT GGCAACAGAC CATCCAGATG TGGTCAAGGC GGTTGAGGCC
GCAGGTGGTG AAGTGTGCCT GACCCGTGCT GATCATCAGT CTGGCACTGA ACGGTTAGCC
GAAGTTATTG AACACTATGG TTTTGCTGAT GACGATATTA TCGTCAATGT TCAGGGCGAT
GAACCCCTTG TGCCGCCGGT GATTATCCGT CAGGTTGCTG ATAATTTGGC TGCATGTAGT
GCCGGCATGG CGACGTTGGC TGTTCCCATT GCAAGCAGTG AAGAGGCGTT TAACCCTAAT
GCCGTTAAAG TGGTTATGGA TGCTCAGGGT TATGCCCTCT ACTTTTCCAG GGCCACCATT
CCGTGGGAAA GAGAGCGCTT TGCTCAATCA AAAGAGACTA TCGGTGATTG TTTCTTACGT
CACATCGGTA TCTATGCCTA TCGAGCAGGT TTTATCCGTC GCTATGTTAA CTGGGCACCC
AGTCAGCTTG AGCAAATTGA ATTGTTAGAG CAACTGCGGG TGTTATGGTA CGGCGAGAAA
ATTCACGTTG CGGTGGCGAA AGCTGTGCCT GCGGTTGGGG TTGATACGCA GAGCGATTTA
GACCGAGTCC GGGCTATCAT GCTCAATCAA TAA
|
|---|
| Protein sequence | MSFIAIIPAR YASTRLPGKP LADIAGKPMV VHVMERALAS GADRVIVATD HPDVVKAVEA
AGGEVCLTRA DHQSGTERLA EVIEHYGFAD DDIIVNVQGD EPLVPPVIIR QVADNLAACS
AGMATLAVPI ASSEEAFNPN AVKVVMDAQG YALYFSRATI PWERERFAQS KETIGDCFLR
HIGIYAYRAG FIRRYVNWAP SQLEQIELLE QLRVLWYGEK IHVAVAKAVP AVGVDTQSDL
DRVRAIMLNQ
|
|---|
| |