| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1951 |
|---|
| Symbol | |
|---|
| ID | 5800421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 2026856 |
|---|
| End bp | 2028703 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641339875 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001606425 |
|---|
| Protein GI | 162419995 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000838552 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.108368 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGGA TGCAATGCAT ATATATCGCC ACTTGGTTAA TCGCAGTATT TACTTCGCCG
ATAGTGATAG CTAACAATAC GAATATTAAT GGCAGTACCA ATAATAACGG TAATGGTACA
ATCAATATTT TTGACGCCAG CAGTAATAAC GATATTCATA CACTAACCGG TCTTGGTAAT
GAGCAGTTGG GAGGATTTAG TAATCATCTT ATCGACTCTC ATAATAATAC GATAGACGGT
GGTCAGAGTA ACAACCTGGT AAGTAGCGAT GGCAATATGA TCAGCGCCAT TAGCTTGGGC
GATGGCCTCT TCTACGGCGC GCAGAATAAC ACGTTAATAA ACTCAAACAA CAACCTACTT
ATTGTCACTC AGGGCAGTAC TATAATAGAT TCTGATAGTA ATACTGTGTC TGGCATTAGT
AATAATCTTA TAGAGAGCAA CAGCAATATT ATCGGTAATG AAAATAGTTG TTATTCGGAT
CCCGCGTCCC CATCAGGAGC GTGGTGCGTT GACAATCAAA ATACGCTCAT TGGCAGTGAT
AACAATACGA TCACTGGTGC GCTGAATGGT CTTCACAACA GTCATAACAA TGATATTATT
GCTAGCTCTG TAAATAATTT AATGGATACG CATAATAATA TTATCGCGGG AGGGCACTAC
AACACCATTA GTGGTGGTGG AAACAATGAC ATTTTGGGGA GTGAAAACAA TGTTACTGAC
AGCACCGACG CCAATATCAA TGGTAGTAAT AACTACGTGA TAGATGGGAA TGGAATTGGT
CGAGATGATT TGACTGAAGA TAACTCTATA TTGGGCGGCT CTGGCAATAT GGGCGTGGGG
GATTCAGTAA CCGCGATTAC CAATAGCGTG GTGTTCGGCG GTAATACATC TGGTAATTCA
ACCGGCTCCA CTCTGACAGA TTCTGTATCG GTTAGCGGCA ACGGTACATC GGGGAATAAT
GTCGTTAATA TCGGCGGAGC GGCAAACGGT AATAATAGTG CTAGCTTAGG TACAGGCTCG
GTATCCTCTG AAGGAGGAAT TGCATTGGGT AGCGGTTCGA TTGCTACACG GAATGATGAA
CTGAATATCG GTGATAGACA AATTACCAGC GTTAAAAAAG GTGTTGAGAA TACAGATACA
ATCAATGTTA GTCAGTTAAA CGATAGCTTT GATGATGTTC TGAATTTATC AAATGAATAT
TCTGACAACT CTTTTTCCAC TGTCACTGAA AATATAAATA ATTATACTGA TGCCTCATTA
GATACTGTGT TGAATACAAC TGGTGAATAT ACCGACAACT CAATATTATT GGTTACTAAT
GAAAGCAATA ATTATACTGA CAATGGCATG GAGAGTGTTA GTAATTATGC AAATATCTAT
GCTGATGAAT CTTTGTTAGC TATCTATAAT GAAGAGGCTA ATTACATGTC TAATCTTATA
GATGTGACGT TAAATAATGC TAATAACTAT ACTGATCTTT CAGTTAATAC CATTATATAT
ACCGGAAAAC AATATACAGA CTCTCGAATC AATGAGTACC AACGTACTTT TAAAAATGAA
TTTTTAACCT ATTCTAATGG AAAATTTGGC GGTTTTGATA AAGATATTAA TCAAAAGCAG
AAACAATTAA ACGCGGGAAT AGCGGCGACG ATGGCTGCTG CGGTTATTCC TCAAAAATCG
GGTTCTAAAG TCTCTATTGG TGTCGGGCTT GCAGGATATA GCGATCAAGG CGCAGGATCT
GTGGGAGCGA TTTGGCATGT AAATCAACGA ATCACAATGA ATACAACGAT GACTTACGAT
ACTCAACGTG GTGTTAGTTT ATTAACGGGT TTATCTATCG GCATATGA
|
|---|
| Protein sequence | MQRMQCIYIA TWLIAVFTSP IVIANNTNIN GSTNNNGNGT INIFDASSNN DIHTLTGLGN
EQLGGFSNHL IDSHNNTIDG GQSNNLVSSD GNMISAISLG DGLFYGAQNN TLINSNNNLL
IVTQGSTIID SDSNTVSGIS NNLIESNSNI IGNENSCYSD PASPSGAWCV DNQNTLIGSD
NNTITGALNG LHNSHNNDII ASSVNNLMDT HNNIIAGGHY NTISGGGNND ILGSENNVTD
STDANINGSN NYVIDGNGIG RDDLTEDNSI LGGSGNMGVG DSVTAITNSV VFGGNTSGNS
TGSTLTDSVS VSGNGTSGNN VVNIGGAANG NNSASLGTGS VSSEGGIALG SGSIATRNDE
LNIGDRQITS VKKGVENTDT INVSQLNDSF DDVLNLSNEY SDNSFSTVTE NINNYTDASL
DTVLNTTGEY TDNSILLVTN ESNNYTDNGM ESVSNYANIY ADESLLAIYN EEANYMSNLI
DVTLNNANNY TDLSVNTIIY TGKQYTDSRI NEYQRTFKNE FLTYSNGKFG GFDKDINQKQ
KQLNAGIAAT MAAAVIPQKS GSKVSIGVGL AGYSDQGAGS VGAIWHVNQR ITMNTTMTYD
TQRGVSLLTG LSIGI
|
|---|
| |