Gene YpAngola_A1931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1931 
Symbol 
ID5800401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2001236 
End bp2002042 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content45% 
IMG OID641339856 
Producthypothetical protein 
Protein accessionYP_001606406 
Protein GI162419574 
COG category[R] General function prediction only 
COG ID[COG4455] Protein of avirulence locus involved in temperature-dependent protein secretion 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.350891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.387623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCA CGAATTTAAC TGAGTTATTA AAAAGCGCGT CTTTAACCGA AATGCTGGCC 
GATGTCATTG CTACGATAAA AGCTAAACCA ACGGACACCG ATACGCGAGA ACTGTTATTC
AAACTCTATT GTATTGATGG TTCATGGCAA AAAGCCCTAT TGCAGCTTGA AACATTGACA
CAGCTTTTAC CTGAGTTCAC CAAACAGGCT GAACTCTATA AAAATCTGAT ATTGAGTGAG
AAAATGCGTG ATGAAGTGCT GGCAGGCAAA CGCAGCCCTG GTACATTGGG TAACGACCTG
CCTGAATGGG TAGCCTTGTT GCAACAAGCT AATCAACTCC ACCATGATGG CGATCATCAG
CAAAGTGAGG CCCTCCGTGA ACAGGCTCTG CAACAGGCAC CGGAAAGTAT CGGAGAGAGT
GCTGCGACAG GCTGCTTCGC TTGGATTGCT GACAGTGATG GGCGCATGGG GCCTGTTTGT
GAGTTTATTA GCGCCGGCGG TTACCGTTGG ATCCCGTTTG CAGAGATACA ATCACTCACT
GTTTCCAAAC CTAAAAATAT TACAGACCTG ATATGGGCGC CGGCACAGGT TAAAGTAAAG
GATAAAGTTT GGTACGGTTA TATACCTGCC CGCTATCCAC TGACACCTGA AACAGACAAT
GAAACTAAAC TGGGTCTTAA AACAGAATGG CATCAACCGA CTGACTCACT TTATATTGGG
GCAGGGCGGA AAATGTTTAT CACCGACCAA GGTGAGCATG CGCTGTTTGA TATTGAAGAG
ATTGTATTTG AAATAGATTG TGTTTGA
 
Protein sequence
MNTTNLTELL KSASLTEMLA DVIATIKAKP TDTDTRELLF KLYCIDGSWQ KALLQLETLT 
QLLPEFTKQA ELYKNLILSE KMRDEVLAGK RSPGTLGNDL PEWVALLQQA NQLHHDGDHQ
QSEALREQAL QQAPESIGES AATGCFAWIA DSDGRMGPVC EFISAGGYRW IPFAEIQSLT
VSKPKNITDL IWAPAQVKVK DKVWYGYIPA RYPLTPETDN ETKLGLKTEW HQPTDSLYIG
AGRKMFITDQ GEHALFDIEE IVFEIDCV