| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1909 |
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| Symbol | ubiD |
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| ID | 5800380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 1981508 |
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| End bp | 1982995 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641339835 |
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| Product | 3-octaprenyl-4-hydroxybenzoate decarboxylase |
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| Protein accession | YP_001606390 |
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| Protein GI | 162418443 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.00500341 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATACC GTGACTTACG TGACTTCCTC TCATTACTGG AACAGAGGGG GGAACTTAAA
CGCATTAGCC AGCCCATTGA TCCTTATTTG GAAATGACAG AAATTGCCGA TCGCACGTTA
CGTGCTGGTG GGCCTGCGTT ACTTTTTGAG AACCCTAAAG GTTACAGCAT GCCCGTGTTG
TGTAATCTGT TTGGCACCGC TAAGCGAGTC GCCATGGGGA TGGGGCAAGA AGATGTCAGC
GCCCTGCGAG ATGTTGGTAA ATTATTGGCC TTCCTGAAAG AACCCGATCC CCCAAAAGGT
TTCCGTGACT TATTTGATAA GCTGCCAAAA TTTAAGCAGG TATTGAATAT GCCAACGAAA
CGCTTGAACT CGGCCCCGTG TCAGGAGCAA GTTTGGCAAG GTGAGGATGT TGATTTAAGT
CGCATCCCTG TGATGCACTG CTGGCCAGAA GATGCCGCAC CACTAGTCTC TTGGGGGTTG
ACTATTACAC GTGGTCCCCA CAAAGAACGG CAGAATCTAG GCATCTATCG CCAGCAGGTA
TTGGGTAAAA ACAAATTAAT TATGCGTTGG CTATCGCATC GTGGTGGTGC GCTGGATTAT
CAGGAGTGGT GTGAGGCACA CCCTGGTGAA CGTTTTCCGG TCGCTGTCGC CTTGGGAGCA
GACCCTGCTA CGATCTTAGC CGCAGTGACC CCGGTACCAG ACACGCTGTC TGAATATGCC
TTTGCCGGCT TGTTACGCGG CCATAAAACG GAAGTGGTGA AGTGTCTTTC CAATGACCTT
GAAGTTCCTG CAAGTGCAGA AATTGTATTG GAAGGATATA TCGAACAAGG TGATATGGCT
CCGGAAGGTC CTTATGGTGA TCATACGGGC TATTACAATG AAATAGATAA TTTCCCCGTG
TTTACCGTCA CGCATATTAC ACAGCGCCAA GACGCAATTT ATCATTCAAC CTATACGGGC
CGACCACCGG ATGAACCTGC GGTAATGGGG GTGGCACTGA ACGAAGTCTT TGTACCTATT
TTGCAAAAGC AATTCCCGGA AATTGTTGAT TTCTACTTGC CACCAGAAGG GTGCTCATAC
CGGTTGGCGG TGGTAACCAT CAAGAAACAA TATGCAGGCC ATGCCAAACG CGTGATGATG
GGAATATGGT CGTTTTTACG CCAGTTTATG TATACCAAGT TTGTTATTGT TTGTGATGAC
GATATTAATG CTCGTGATTG GAATGATGTA ATTTGGGCGA TCACCACCCG GATGGACCCA
TCCCGCGATA CGGTGTTAAT TGAAAATACA CCGATAGATT ATTTGGATTT CGCCTCACCG
GTTTCCGGTT TGGGATCGAA AATGGGGCTG GATGCCACCA ACAAATGGCC AGCAGAGACT
CCGCGTGAAT GGGGGCGTCC AATTAAGATG GACGAAGACG TCCGTGCCCG TATTGATGCT
CTGTGGGATG AGCTGGCCAT TTTCAGTGAC AAAGACGCGA AACGCTAA
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| Protein sequence | MKYRDLRDFL SLLEQRGELK RISQPIDPYL EMTEIADRTL RAGGPALLFE NPKGYSMPVL
CNLFGTAKRV AMGMGQEDVS ALRDVGKLLA FLKEPDPPKG FRDLFDKLPK FKQVLNMPTK
RLNSAPCQEQ VWQGEDVDLS RIPVMHCWPE DAAPLVSWGL TITRGPHKER QNLGIYRQQV
LGKNKLIMRW LSHRGGALDY QEWCEAHPGE RFPVAVALGA DPATILAAVT PVPDTLSEYA
FAGLLRGHKT EVVKCLSNDL EVPASAEIVL EGYIEQGDMA PEGPYGDHTG YYNEIDNFPV
FTVTHITQRQ DAIYHSTYTG RPPDEPAVMG VALNEVFVPI LQKQFPEIVD FYLPPEGCSY
RLAVVTIKKQ YAGHAKRVMM GIWSFLRQFM YTKFVIVCDD DINARDWNDV IWAITTRMDP
SRDTVLIENT PIDYLDFASP VSGLGSKMGL DATNKWPAET PREWGRPIKM DEDVRARIDA
LWDELAIFSD KDAKR
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