Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1903 |
Symbol | |
ID | 5800374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 1976454 |
End bp | 1977347 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641339829 |
Product | LysR family substrate-binding transcriptional regulator |
Protein accession | YP_001606384 |
Protein GI | 162420915 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.00435241 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTAAAAG AAAACTTCAA TGAACTGCAG AGCTTTCTTG TTGTTGCTAG AGAGAGAAGT TTTACCAAAG CAGCAGGTAA GCTGGGGGTT TCTCAGTCGG CACTCAGCCA CGCAATTAAG GGACTGGAAG AAAGATTAAA CCTACGCCTT CTGACCCGAA CAACGCGAAG TGTCGCTCCC ACAGAAGCTG GTGAGCGAAT TATTGCCTGC CTGGAACCTC GTCTGGCAGA TCTTGAACAA GAGTTGGAAA CCCTTCTCCA ACTGAACGGT ACTGTATCAG GCAATATCCG GCTCTCTGCG GGAGAGCACG CAGCACGTAG CTTGTTGTGG CCAAAGTTAA AACCATTTCT CAGAAAATAC CCGGAAATCA ATGTCGAACT GGTGGTTGAT AATGGTTTCG TCAATATCGT AGATGGCCGC TTCGATGCCG GCGTTCGTCT TGGCGAGAGT GTCGATAAGG ACATGATTGC CGTAAAGATC GGGCCGGAAA TGCGTATGGC CGTCGTCGGC TCGCCAGAAT ACTTTATGGC AAACGCCATT CCCGTCACGC CACATGAATT ACAGCATCAT CGCTGCATTA ATATGCGGCT GCCCACCGCC GGAGGTTTGT ATCACTGGGA GTTTGAGAAA GAAGGCAAGC CGCTGCGTGT GAAAGTTGAA GGCCAGTTGA CGCTGAACAT CCTGCCAGAA AGGATAGACG CGGCGCAGTC AGGATTTGGC CTTGCTTGCG TGCCAGAGGA TTCGATTCAG GCATTCTTAA GATCCGGGAA ACTTATTCAG GTGCTGGAAG CGTGGTGTCC ATCTTTCCCT GGTTATTACC TTTACTACCC AAGTAGAAAA CAGCACCCAC CTGTTTTTGC GCTTATGATA GATGCACTGC GTTATTCGGA TTAA
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Protein sequence | MLKENFNELQ SFLVVARERS FTKAAGKLGV SQSALSHAIK GLEERLNLRL LTRTTRSVAP TEAGERIIAC LEPRLADLEQ ELETLLQLNG TVSGNIRLSA GEHAARSLLW PKLKPFLRKY PEINVELVVD NGFVNIVDGR FDAGVRLGES VDKDMIAVKI GPEMRMAVVG SPEYFMANAI PVTPHELQHH RCINMRLPTA GGLYHWEFEK EGKPLRVKVE GQLTLNILPE RIDAAQSGFG LACVPEDSIQ AFLRSGKLIQ VLEAWCPSFP GYYLYYPSRK QHPPVFALMI DALRYSD
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