Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1878 |
Symbol | |
ID | 5800349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1946421 |
End bp | 1947275 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641339809 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_001606364 |
Protein GI | 162419389 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.00289496 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACTACAG CAAGCAATCT GAGTGAACTA CAGCAGCAGA TCCGTGATCG TTACGACAAC CTGAGTAAGC GGCTGCAGCA AGTCTCCCGC TATGTGTTGG ACAATACCAA CAGCGTGGCG TTTGACACCG TTGCCGTCAT TGCCGAACGC GCAGACGTGC CTCCGTCAAC CTTAATTCGT TTTGCTAACG CCTTTGATTT CAGTGGCTTC AACGAGATGA AACAGCTGTT TCGTATGAAT CTGGTGGAAG AGACCGCGAG TTATACCGAT CGTGCACGGC TGTTTCGCGC AATGGAAAGC GAAGCCGTGC CGGAAACGCC ACTCGGTATC CTGCAAGAGT TTGCCCGATC CAATGCTCAG GCACTACAGC AGTTGGCGGC ACGTACTGAG CCAGAGATGC TGCAACGTGC GGTGGAACTG CTTGCTCAGG CCGATACCAT TTATGTGGTG GGCCTGCGCC GCTCGTTCAG CGTGGCCGCC TATCTGACCT ACGCACTCAG CCATTTAGAA TGTCGCCCAG TACAACTTCA TGGCCTCGGG GGGATGTTGC GCGAGCAGGT GAACAGCATT AAAGCACGCG ATATCGTGGT TTCTATCAGT TTCTCTCCTT ACGCCGAAGA GACCGTGATG GTCAGCGAAA TAGCCGCTAG CGCGGGTGCC CGGCAGATTG TCATTACCGA CAGCCAGATA AGCCCGCTCG CCACGTTCAG CGATCTCTGT TTTGTGGTGA AAGAGGCTCA GGTAGATGCC TTCCGATCTC AATCAGCCAC GCTCTGTCTA GTGCAGTCGC TGGTCGTGGC GTTGGCCTAC CAGCAGGAGG CGCAGGCCGG GGCCGCGCTG GCGCACAGAC AGTGA
|
Protein sequence | MTTASNLSEL QQQIRDRYDN LSKRLQQVSR YVLDNTNSVA FDTVAVIAER ADVPPSTLIR FANAFDFSGF NEMKQLFRMN LVEETASYTD RARLFRAMES EAVPETPLGI LQEFARSNAQ ALQQLAARTE PEMLQRAVEL LAQADTIYVV GLRRSFSVAA YLTYALSHLE CRPVQLHGLG GMLREQVNSI KARDIVVSIS FSPYAEETVM VSEIAASAGA RQIVITDSQI SPLATFSDLC FVVKEAQVDA FRSQSATLCL VQSLVVALAY QQEAQAGAAL AHRQ
|
| |