Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1858 |
Symbol | cspE |
ID | 5800329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 1925675 |
End bp | 1925884 |
Gene Length | 210 bp |
Protein Length | 69 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641339790 |
Product | cold shock protein CspE |
Protein accession | YP_001606345 |
Protein GI | 162418633 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0644498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.32354 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTAAGA TTAAAGGTAG CGTTAAGTGG TTCAATGAAT CCAAAGGTTT CGGCTTCATT ACCCCAGAAG ATGGTAGCAA GGACGTTTTT GTTCATTTTT CTGCCATCGC TAGCAATGGT TTCAAAACGC TTGCTGAAGG CCAGCGTGTA GAATTTGAAA TCACGAACGG TGCCAAAGGG CCATCTGCTG CTAATGTTAT CGCTATCTAA
|
Protein sequence | MSKIKGSVKW FNESKGFGFI TPEDGSKDVF VHFSAIASNG FKTLAEGQRV EFEITNGAKG PSAANVIAI
|
| |