Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1844 |
Symbol | holA |
ID | 5800315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1912660 |
End bp | 1913694 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641339776 |
Product | DNA polymerase III subunit delta |
Protein accession | YP_001606331 |
Protein GI | 162418671 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGGA TTTACCCTGA ACAACTTGTC GCGCAGCTCC ATGAGGGGCT ACGCGCTTGT TATCTATTGT GTGGCAATGA ACCCTTGTTG CTACAGGAAA GTCAGGACCA CATTCGTCGG GTGGCATCGC AGCACGATTT CACTGAGCAT TTCAGCTTTG CGTTGGACGC GCACACCGAA TGGGAGCATA TTTTTAGCCT TTGCCAGGCA CTGAGTTTGT TCGCCAGCCG CCAGACACTG CTGCTGAGTT TCCCAGACAG TGGGCTGACC GCGCCAATTA GCGAGCAGTT GGTTAAATTA TCTGGCCTGT TACACCCAGA CATTTTATTG ATATTGCGGG CGAATAAGTT GACCAAAGCG CAAGAGAACA GCGCCTGGTT TAAAGCTCTC AGTAAAAATG GGGTATTTGT CAGTTGCCAG ACACCAGAAC AGGCCCAGCT TCCCCGCTGG GTGAGCGCTC GCGCCAAGAG CCTCAACTTG AACGTAGACG ATGCCGCCAT TCAATTACTT TGCTACTGCT ATGAAGGTAA CTTGCTGGCC TTATCTCAGG CGTTAGAACG GCTCTCGCTG CTCTACCCCG ACGGTAAGTT AACCCTGCCT AAAGTAGAAC AAGCCGTCAA CGACGCTGCG CATTTCACAC CATACCATTG GCTTGATGCC TTGTTGATGG GGAAGAGCAA GCGGGCTTGG CATATTTTGC AGCAATTACA GCAAGAAGAC AGTGAACCCG TTATTTTACT GCGTACCGTA CAACGTGAAC TGCTCCTGCT GTTAGCGCTC AAACGTCAGA TGGAACAAGT TCCATTGCGC GCATTATTCG ATCAACACAA AATTTGGCAG AACCGGCGGC CCATGATGAC TCAGGCACTG CAACGGCTCT CCCTTCAGCA ACTGCAACAG GCGGTTCATC TGCTCACACA GATGGAAATC CGGCTGAAAC AGGATTATGG TCAATCAATC TGGCCTGAGT TAGAAACGCT ATCTATGCTG ATGTGTGGAA AAACATTACC TGAGAGCTTT TTTGATGCCC ATTAA
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Protein sequence | MIRIYPEQLV AQLHEGLRAC YLLCGNEPLL LQESQDHIRR VASQHDFTEH FSFALDAHTE WEHIFSLCQA LSLFASRQTL LLSFPDSGLT APISEQLVKL SGLLHPDILL ILRANKLTKA QENSAWFKAL SKNGVFVSCQ TPEQAQLPRW VSARAKSLNL NVDDAAIQLL CYCYEGNLLA LSQALERLSL LYPDGKLTLP KVEQAVNDAA HFTPYHWLDA LLMGKSKRAW HILQQLQQED SEPVILLRTV QRELLLLLAL KRQMEQVPLR ALFDQHKIWQ NRRPMMTQAL QRLSLQQLQQ AVHLLTQMEI RLKQDYGQSI WPELETLSML MCGKTLPESF FDAH
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