| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1821 |
|---|
| Symbol | |
|---|
| ID | 5800292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 1887187 |
|---|
| End bp | 1889079 |
|---|
| Gene Length | 1893 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641339754 |
|---|
| Product | citrate transporter family protein |
|---|
| Protein accession | YP_001606309 |
|---|
| Protein GI | 162420408 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCACT GCCAGAGCCG GATATTCTCT TTCACTTTTT GTTTTGCCAA CGAGGCCATT
TTGAACAGCG AACTACTGTG GGTGTTGACG CTACTGCTGA TAGCTATTGT GCTGTTTACC
ACGAATAAAC TGCGAATGGA TGTCGTCGCG TTGTTGGTGA TTATTGCCTT TGTGATGAGT
GGAACATTGT CATTATCTGA GGCTACCAGT GGGTTCAGTG ATCCCAATGT TATCTTGATT
GCTGCGTTGT TTGTGATTGG TGAAGGGTTA GTCAGGACTG GTGTCGCCTA CCAAATGGGT
GATTGGTTGG TGAAAGTGGC CGGCCACAGT GAAACAAAAA TGTTAGCGTT GCTAATGGTT
ACCGTCGCCG GATTGGGTGC CTTTATGAGT TCAACTGGCG TCGTGGCGAT TTTTATTCCA
GTGGTACTGA GTGTGGCTAG CCGGATGAAA ATCTCACCGG GCCGTTTGAT GATGCCACTG
AGTTTTGCCG GTTTAATCAG CGGCATGATG ACTCTGGTAG CAACCCCGCC CAATATGGTG
GTCAACAGTG AATTAGTACG CGAAGGGATC AAAGGGTTCG GTTTCTTCGG CGTGACACCA
ATTGGCATTA TCATTTTGTT CATGGGCGTG GCTTACATGT TAGTTGCCCG GCGCTGGCTG
GGGGGCAAAC AAGAGCACAC TGAGAAAGAT CAATGGAAGC GGCGTACCTT CCGTGATCTG
ATTCGCGATT ATAAGCTGAC CGGTCGTGCC CGTCGTCTGG CTATTCGTCA TGGCTCCCCA
TTGATTGGTC GTTCACTCGA TGAATTGCAT CTGCGCGCCC GTTATGGCGC GAATGTAGTG
GGTATTGAAC GGTGGCGGCG TTTTCGTCGG GTGATGGTGA GTGCGACAGG CTCGTCGGAA
CTGCGTGAAA ATGATGTGTT GCTGATTGAT ATGTCCGATT GTGATATGGA CTTACGTGAA
TTCTGTAGCG AACAGATGCT AGAACCACTG GTGTTACGTG GTGAGTATTT CTCTGAACAA
TCCCGCAATG TGGGGATGGC GGAGGTTTCG CTGATCCCGG ATTCAGCACT GTTGGGGAAA
AATTTGCGTG AGGTGGCCTT TCGCAGCCGT TATGGTTTGA ACGTGGTGGG GATCCGCCGC
AACGGTAAGA CCTTAGAAGG CAAGTTGGTT GATGACAAGT TACAGTTTGG CGATATTTTG
CTGGTGATCG GCGATTGGAA ATTGATTCGC CAGTTACAGT TAAAAACCCG CGATTTTATT
GTTCTGAACC TGCCCGCAGA AGTTGATGAA GTTGCGCCAG CCATTTCGCA GGCTCCCCAT
GCGCTATTCT GCCTGGCGCT CATGGTTGCC ATGATGCTGA CTGACGAAGT CCCGAATGTC
ATTGCCGCGC TGGTGGCCTG TCTGTTGATG GGGCAGTTCC GGTGTATCGA TATGGAAAGT
GCCTACCGTT CAATCCATTG GCCGAGTTTG ATTCTGATTA TCGGGATGAT GCCTTTCGCC
CAGGCATTGC AGAAAACCGG TGGGGTAGAT TTGATTGTTC GCGGACTAAT GGATGTCGCG
GGTGGAATGG GGCCAAGGGT GATGCTGCTG TGCTTATTTG TACTGTGTGC GACGATTGGG
CTGTTTATCT CTAATACCGC CACCGCCGTA TTAATGGCAC CAATTGCTAT TGCGACCGCC
CGTGAGATGG CGCTTTCCCC ATATCCCTTC GCCATGATTA TTGGTATCGC CGCGTCAGCT
GCTTTTATGA CGCCAGTATC TTCGCCGGTG AATACATTGG TCTTAGGCCC CGGGGGTTAT
AAATTCGGTG ATTTCGTCCG TATGGGGGTG CCGTTTACTG TACTGGTCAT GATCGTCAGT
GTGATGGTGG TTCCCTTACT ATTCCCATTC TGA
|
|---|
| Protein sequence | MFHCQSRIFS FTFCFANEAI LNSELLWVLT LLLIAIVLFT TNKLRMDVVA LLVIIAFVMS
GTLSLSEATS GFSDPNVILI AALFVIGEGL VRTGVAYQMG DWLVKVAGHS ETKMLALLMV
TVAGLGAFMS STGVVAIFIP VVLSVASRMK ISPGRLMMPL SFAGLISGMM TLVATPPNMV
VNSELVREGI KGFGFFGVTP IGIIILFMGV AYMLVARRWL GGKQEHTEKD QWKRRTFRDL
IRDYKLTGRA RRLAIRHGSP LIGRSLDELH LRARYGANVV GIERWRRFRR VMVSATGSSE
LRENDVLLID MSDCDMDLRE FCSEQMLEPL VLRGEYFSEQ SRNVGMAEVS LIPDSALLGK
NLREVAFRSR YGLNVVGIRR NGKTLEGKLV DDKLQFGDIL LVIGDWKLIR QLQLKTRDFI
VLNLPAEVDE VAPAISQAPH ALFCLALMVA MMLTDEVPNV IAALVACLLM GQFRCIDMES
AYRSIHWPSL ILIIGMMPFA QALQKTGGVD LIVRGLMDVA GGMGPRVMLL CLFVLCATIG
LFISNTATAV LMAPIAIATA REMALSPYPF AMIIGIAASA AFMTPVSSPV NTLVLGPGGY
KFGDFVRMGV PFTVLVMIVS VMVVPLLFPF
|
|---|
| |